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Platform GPL16696 Query DataSets for GPL16696
Status Public on Jul 04, 2013
Title 080829_B_taurus_JK_EXP
Technology type in situ oligonucleotide
Distribution custom-commercial
Organisms Theileria annulata; Bos taurus
Manufacturer NimbleGen
Manufacture protocol Expression array - 1plex 385k expression array
Description 385K expression array representing all available RefSeq RNA sequences plus additional EST sequences for Bos taurus and including all predicted coding sequences of the bovine intracellular parasite Theileria annulata. 60 mer probe array, five probes per gene, replicated in 2 blocks.
native array description file: 080829_B_taurus_JK_EXP.ndf
native array description file: 080829_B_taurus_JK_EXP.ngd
Submission date Feb 19, 2013
Last update date Jul 06, 2013
Contact name William Weir
Organization name University of Glasgow
Department Institute of Infection, Immunity and Inflammation
Lab Theileria lab
Street address Room 220, Henry Wellcome Building, Garscube Campus, Bearsden Road
City Glasgow
ZIP/Postal code G61 1QH
Country United Kingdom
Samples (18) GSM1084727, GSM1084728, GSM1084729, GSM1084730, GSM1084731, GSM1084732 
Series (1)
GSE44414 A bovine lymphosarcoma cell line infected with Theileria annulata exhibits an irreversible reconfiguration of host cell gene expression

Data table header descriptions
SPECIES Species to which the indicated probeset is directed (Bos taurus or Theileria annulata)
ENTREZ_GENE_ID GenBank GI number of sequence to which the indicated probeset is directed (bovine)
ORF TA_NUMBER Gene symbol or locus tag in NCBI gene database of T. annulata sequence to which the indicated probeset is directed. Also systematic name for gene in GeneDB. LINK_SUFF:"[gene]"
GB_ACC REFSEQ NCBI Reference Sequence (RefSeq) to which the indicated probeset is directed (bovine)
GB_ACC GenBank accesion number or version of sequence to which the indicated probeset is directed (bovine)

Data table
gi_10025444_gb_BE665170.1_BE665170 Bos taurus 10025444 BE665170.1
gi_10026025_gb_BE665444.1_BE665444 Bos taurus 10026025 BE665444.1
gi_10026167_gb_BE665576.1_BE665576 Bos taurus 10026167 BE665576.1
gi_10028074_gb_BE667483.1_BE667483 Bos taurus 10028074 BE667483.1
gi_10029506_gb_BE668915.1_BE668915 Bos taurus 10029506 BE668915.1
gi_10029531_gb_BE668940.1_BE668940 Bos taurus 10029531 BE668940.1
gi_10069007_gb_BE682790.1_BE682790 Bos taurus 10069007 BE682790.1
gi_10070555_gb_BE683562.1_BE683562 Bos taurus 10070555 BE683562.1
gi_10123255_gb_BE721959.1_BE721959 Bos taurus 10123255 BE721959.1
gi_10123415_gb_BE722119.1_BE722119 Bos taurus 10123415 BE722119.1
gi_10124223_gb_BE722927.1_BE722927 Bos taurus 10124223 BE722927.1
gi_10124619_gb_BE723386.1_BE723386 Bos taurus 10124619 BE723386.1
gi_10169306_gb_BE755314.1_BE755314 Bos taurus 10169306 BE755314.1
gi_10169687_gb_BE755695.1_BE755695 Bos taurus 10169687 BE755695.1
gi_10171979_gb_BE757987.1_BE757987 Bos taurus 10171979 BE757987.1
gi_10282519_gb_BE845695.1_BE845695 Bos taurus 10282519 BE845695.1
gi_103472132_ref_NM_001034465.2_ Bos taurus 103472132 NM_001034465.2
gi_103472137_ref_NM_001014863.2_ Bos taurus 103472137 NM_001014863.2
gi_106880502_ref_NM_001034710.2_ Bos taurus 106880502 NM_001034710.2
gi_106880506_ref_NM_174482.2_ Bos taurus 106880506 NM_174482.2

Total number of rows: 34426

Table truncated, full table size 2180 Kbytes.

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL16696_080829_B_taurus_JK_EXP.ndf.gz 20.9 Mb (ftp)(http) NDF
GPL16696_080829_B_taurus_JK_EXP.ngd.gz 1020.1 Kb (ftp)(http) NGD

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