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Status
Public on Apr 01, 2013
Title
NCI Glycoarray-220
Technology type
spotted peptide or protein
Distribution
non-commercial
Organisms
Quercus alba ; Gossypium hirsutum ; Medicago sativa ; Rhodotorula ; Pandalus borealis ; Gallus gallus ; Homo sapiens ; Bos taurus ; Ovis aries ; Mus musculus ; Megathura crenulata ; Bothrops moojeni ; Frangula alnus ; Senegalia senegal ; Pachymenia carnosa ; Dermestes lardarius
Manufacturer
National Cancer Institute, Chemical Glycobiology Section
Manufacture protocol
Glycoproteins and neoglycoproteins spotted onto epoxide functionalized glass slides (ArrayIt SME2) using a MicroGrid II arrayer.
Support
Glass
Coating
Epoxide
Description
Spotted glycoproteins and neoglycoproteins Each slide contains 16 identical array containing 220 components printed in duplicate (440 features total)
Citation(s)
22057524
Submission date
Nov 04, 2012
Last update date
Apr 01, 2013
Contact name
Christopher Campbell
Organization name
NCI
Street address
376 Boyles Street
City
Frederick
State/province
MD
ZIP/Postal code
21702
Country
USA
Samples (960)
GSM1030653 , GSM1030654 , GSM1030655 , GSM1030656 , GSM1030657 , GSM1030658
GSM1030659 ,
GSM1030660 ,
GSM1030661 ,
GSM1030662 ,
GSM1030663 ,
GSM1030664 ,
GSM1030665 ,
GSM1030666 ,
GSM1030667 ,
GSM1030668 ,
GSM1030669 ,
GSM1030670 ,
GSM1030671 ,
GSM1030672 ,
GSM1030673 ,
GSM1030674 ,
GSM1030675 ,
GSM1030676 ,
GSM1030677 ,
GSM1030678 ,
GSM1030679 ,
GSM1030680 ,
GSM1030681 ,
GSM1030682 ,
GSM1030683 ,
GSM1030684 ,
GSM1030685 ,
GSM1030686 ,
GSM1030687 ,
GSM1030688 ,
GSM1030689 ,
GSM1030690 ,
GSM1030691 ,
GSM1030692 ,
GSM1030693 ,
GSM1030694 ,
GSM1030695 ,
GSM1030696 ,
GSM1030697 ,
GSM1030698 ,
GSM1030699 ,
GSM1030700 ,
GSM1030701 ,
GSM1030702 ,
GSM1030703 ,
GSM1030704 ,
GSM1030705 ,
GSM1030706 ,
GSM1030707 ,
GSM1030708 ,
GSM1033785 ,
GSM1033786 ,
GSM1033787 ,
GSM1033788 ,
GSM1033789 ,
GSM1033790 ,
GSM1033791 ,
GSM1033792 ,
GSM1033793 ,
GSM1033794 ,
GSM1033795 ,
GSM1033796 ,
GSM1033797 ,
GSM1033798 ,
GSM1033799 ,
GSM1033800 ,
GSM1033801 ,
GSM1033802 ,
GSM1033803 ,
GSM1033804 ,
GSM1033805 ,
GSM1033806 ,
GSM1033807 ,
GSM1033808 ,
GSM1033809 ,
GSM1033810 ,
GSM1033811 ,
GSM1033812 ,
GSM1033813 ,
GSM1033814 ,
GSM1033815 ,
GSM1033816 ,
GSM1033817 ,
GSM1033818 ,
GSM1033819 ,
GSM1033820 ,
GSM1033821 ,
GSM1033822 ,
GSM1033823 ,
GSM1033824 ,
GSM1033825 ,
GSM1033826 ,
GSM1033827 ,
GSM1033828 ,
GSM1033829 ,
GSM1033830 ,
GSM1033831 ,
GSM1033832 ,
GSM1033833 ,
GSM1033834 ,
GSM1033835 ,
GSM1033836 ,
GSM1033837 ,
GSM1033838 ,
GSM1033839 ,
GSM1033840 ,
GSM1033841 ,
GSM1033842 ,
GSM1033843 ,
GSM1033844 ,
GSM1033845 ,
GSM1033846 ,
GSM1033847 ,
GSM1033848 ,
GSM1033849 ,
GSM1033850 ,
GSM1033851 ,
GSM1033852 ,
GSM1033853 ,
GSM1033854 ,
GSM1033855 ,
GSM1033856 ,
GSM1033857 ,
GSM1033858 ,
GSM1033859 ,
GSM1033860 ,
GSM1033861 ,
GSM1033862 ,
GSM1033863 ,
GSM1033864 ,
GSM1033865 ,
GSM1033866 ,
GSM1033867 ,
GSM1033868 ,
GSM1033869 ,
GSM1033870 ,
GSM1033871 ,
GSM1033872 ,
GSM1033873 ,
GSM1033874 ,
GSM1033875 ,
GSM1033876 ,
GSM1033877 ,
GSM1033878 ,
GSM1033879 ,
GSM1033880 ,
GSM1033881 ,
GSM1033882 ,
GSM1033883 ,
GSM1033884 ,
GSM1033885 ,
GSM1033886 ,
GSM1033887 ,
GSM1033888 ,
GSM1033889 ,
GSM1033890 ,
GSM1033891 ,
GSM1033892 ,
GSM1033893 ,
GSM1033894 ,
GSM1033895 ,
GSM1033896 ,
GSM1033897 ,
GSM1034143 ,
GSM1034144 ,
GSM1034145 ,
GSM1034146 ,
GSM1034147 ,
GSM1034148 ,
GSM1034149 ,
GSM1034150 ,
GSM1034151 ,
GSM1034152 ,
GSM1034153 ,
GSM1034154 ,
GSM1034155 ,
GSM1034156 ,
GSM1034157 ,
GSM1034158 ,
GSM1034159 ,
GSM1034160 ,
GSM1034161 ,
GSM1034162 ,
GSM1034163 ,
GSM1034164 ,
GSM1034165 ,
GSM1034166 ,
GSM1034167 ,
GSM1034168 ,
GSM1034169 ,
GSM1034170 ,
GSM1034171 ,
GSM1034172 ,
GSM1034173 ,
GSM1034174 ,
GSM1034175 ,
GSM1034176 ,
GSM1034177 ,
GSM1034178 ,
GSM1034179 ,
GSM1034180 ,
GSM1034181 ,
GSM1034182 ,
GSM1034183 ,
GSM1034184 ,
GSM1034185 ,
GSM1034186 ,
GSM1034187 ,
GSM1034188 ,
GSM1034189 ,
GSM1034190 ,
GSM1034191 ,
GSM1034192 ,
GSM1034193 ,
GSM1034194 ,
GSM1034195 ,
GSM1034196 ,
GSM1034197 ,
GSM1034198 ,
GSM1034199 ,
GSM1034200 ,
GSM1034201 ,
GSM1034202 ,
GSM1034203 ,
GSM1034204 ,
GSM1034205 ,
GSM1034206 ,
GSM1034207 ,
GSM1034208 ,
GSM1034209 ,
GSM1034210 ,
GSM1034211 ,
GSM1034212 ,
GSM1034213 ,
GSM1034214 ,
GSM1034215 ,
GSM1034216 ,
GSM1034217 ,
GSM1034218 ,
GSM1034219 ,
GSM1034220 ,
GSM1034221 ,
GSM1034222 ,
GSM1034223 ,
GSM1034224 ,
GSM1034225 ,
GSM1034226 ,
GSM1034227 ,
GSM1034228 ,
GSM1034229 ,
GSM1034230 ,
GSM1034231 ,
GSM1034232 ,
GSM1034233 ,
GSM1034234 ,
GSM1034235 ,
GSM1034236 ,
GSM1034237 ,
GSM1034238 ,
GSM1034239 ,
GSM1034240 ,
GSM1034241 ,
GSM1034242 ,
GSM1034243 ,
GSM1034244 ,
GSM1034245 ,
GSM1034246 ,
GSM1034247 ,
GSM1034248 ,
GSM1034249 ,
GSM1034250 ,
GSM1034251 ,
GSM1034252 ,
GSM1034253 ,
GSM1034254 ,
GSM1034255 ,
GSM1034256 ,
GSM1034257 ,
GSM1034258 ,
GSM1034259 ,
GSM1034260 ,
GSM1034261 ,
GSM1034262 ,
GSM1034263 ,
GSM1034264 ,
GSM1034265 ,
GSM1034266 ,
GSM1034267 ,
GSM1034268 ,
GSM1034269 ,
GSM1034270 ,
GSM1034271 ,
GSM1034272 ,
GSM1034273 ,
GSM1034274 ,
GSM1034275 ,
GSM1034276 ,
GSM1034277 ,
GSM1034278 ,
GSM1034279 ,
GSM1034280 ,
GSM1034281 ,
GSM1034282 ,
GSM1034283 ,
GSM1034284 ,
GSM1034285 ,
GSM1034286 ,
GSM1034287 ,
GSM1034288 ,
GSM1034289 ,
GSM1034290 ,
GSM1034291 ,
GSM1034292 ,
GSM1034293 ,
GSM1034294 ,
GSM1034295 ,
GSM1034296 ,
GSM1034297 ,
GSM1034298 ,
GSM1034299 ,
GSM1034300 ,
GSM1034301 ,
GSM1034302 ,
GSM1034303 ,
GSM1034304 ,
GSM1034305 ,
GSM1034306 ,
GSM1034307 ,
GSM1034308 ,
GSM1034309 ,
GSM1034310 ,
GSM1034311 ,
GSM1034312 ,
GSM1034313 ,
GSM1034314 ,
GSM1034315 ,
GSM1034316 ,
GSM1034317 ,
GSM1034318 ,
GSM1034319 ,
GSM1034320 ,
GSM1034321 ,
GSM1034322 ,
GSM1034323 ,
GSM1034324 ,
GSM1034325 ,
GSM1034326 ,
GSM1034327 ,
GSM1034328 ,
GSM1034329 ,
GSM1034330 ,
GSM1034331 ,
GSM1034332 ,
GSM1034333 ,
GSM1034334 ,
GSM1034335 ,
GSM1034336 ,
GSM1034337 ,
GSM1034338 ,
GSM1034339 ,
GSM1034340 ,
GSM1034341 ,
GSM1034342 ,
GSM1034343 ,
GSM1034344 ,
GSM1034345 ,
GSM1034346 ,
GSM1034347 ,
GSM1034348 ,
GSM1034349 ,
GSM1034350 ,
GSM1034351 ,
GSM1034352 ,
GSM1034353 ,
GSM1034354 ,
GSM1034355 ,
GSM1034356 ,
GSM1034357 ,
GSM1034358 ,
GSM1034359 ,
GSM1034360 ,
GSM1034361 ,
GSM1034362 ,
GSM1034363 ,
GSM1034364 ,
GSM1034365 ,
GSM1034366 ,
GSM1034367 ,
GSM1034368 ,
GSM1034391 ,
GSM1034392 ,
GSM1034393 ,
GSM1034394 ,
GSM1034395 ,
GSM1034396 ,
GSM1034397 ,
GSM1034398 ,
GSM1034399 ,
GSM1034400 ,
GSM1034401 ,
GSM1034402 ,
GSM1034403 ,
GSM1034404 ,
GSM1034405 ,
GSM1034406 ,
GSM1034407 ,
GSM1034408 ,
GSM1034409 ,
GSM1034410 ,
GSM1034411 ,
GSM1034412 ,
GSM1034413 ,
GSM1034414 ,
GSM1034415 ,
GSM1034416 ,
GSM1034417 ,
GSM1034418 ,
GSM1034419 ,
GSM1034420 ,
GSM1034421 ,
GSM1034422 ,
GSM1034423 ,
GSM1034424 ,
GSM1034425 ,
GSM1034426 ,
GSM1034427 ,
GSM1034428 ,
GSM1034429 ,
GSM1034430 ,
GSM1034431 ,
GSM1034432 ,
GSM1034433 ,
GSM1034434 ,
GSM1034435 ,
GSM1034436 ,
GSM1034437 ,
GSM1034438 ,
GSM1034439 ,
GSM1034440 ,
GSM1034441 ,
GSM1034442 ,
GSM1034443 ,
GSM1034444 ,
GSM1034445 ,
GSM1034446 ,
GSM1034447 ,
GSM1034448 ,
GSM1034449 ,
GSM1034450 ,
GSM1034451 ,
GSM1034452 ,
GSM1034453 ,
GSM1034454 ,
GSM1034455 ,
GSM1034456 ,
GSM1034457 ,
GSM1034458 ,
GSM1034459 ,
GSM1034460 ,
GSM1034461 ,
GSM1034462 ,
GSM1034463 ,
GSM1034464 ,
GSM1034465 ,
GSM1034466 ,
GSM1034467 ,
GSM1034468 ,
GSM1034469 ,
GSM1034470 ,
GSM1034471 ,
GSM1034472 ,
GSM1034473 ,
GSM1034474 ,
GSM1034475 ,
GSM1034476 ,
GSM1034477 ,
GSM1034478 ,
GSM1034479 ,
GSM1034480 ,
GSM1034481 ,
GSM1034482 ,
GSM1034483 ,
GSM1034484 ,
GSM1034485 ,
GSM1034486 ,
GSM1034487 ,
GSM1034488 ,
GSM1034489 ,
GSM1034490 ,
GSM1034491 ,
GSM1034492 ,
GSM1034493 ,
GSM1034494 ,
GSM1034495 ...
Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here
Series (12)
GSE42019
Baseline serum anti-glycan antibodies of 28 subjects in a clinical trial of PROSTVAC-VF, a therapeutic cancer vaccine [Training IgG 1:50]
GSE42020
Baseline serum anti-glycan antibodies of 28 subjects in a clinical trial of PROSTVAC-VF, a therapeutic cancer vaccine [Training IgM 1:50]
GSE42163
Baseline serum anti-glycan antibodies of 113 subjects in a clinical trial of PROSTVAC-VF, a therapeutic cancer vaccine [Validation IgG 1:50]
GSE42175
Baseline serum anti-glycan antibodies of 113 subjects in a clinical trial of PROSTVAC-VF, a therapeutic cancer vaccine [Validation IgM 1:50]
GSE42176
Baseline serum anti-glycan antibodies of 113 subjects in a clinical trial of PROSTVAC-VF, a therapeutic cancer vaccine [Validation Total Ig 1:50]
GSE42179
Baseline serum anti-glycan antibodies of 113 subjects in a clinical trial of PROSTVAC-VF, a therapeutic cancer vaccine [Validation Total Ig 1:200]
GSE42184
Baseline serum anti-glycan antibodies of 113 subjects in a clinical trial of PROSTVAC-VF, a therapeutic cancer vaccine
GSE50235
Post-vaccination serum anti-glycan IgG antibodies of 113 subjects in a clinical trial of PROSTVAC-VF, a therapeutic cancer vaccine. (Dilution = 1:50)
GSE50236
Baseline serum anti-glycan total Ig antibodies of 113 subjects in a clinical trial of PROSTVAC-VF, a therapeutic cancer vaccine. (Dilution = 1:50)
GSE50237
Baseline serum anti-glycan IgM antibodies of 113 subjects in a clinical trial of PROSTVAC-VF, a therapeutic cancer vaccine. (Dilution = 1:50)
GSE50239
Post-vaccination serum anti-glycan total Ig antibodies of 113 subjects in a clinical trial of PROSTVAC-VF, a therapeutic cancer vaccine. (Dilution = 1:200)
GSE50410
Anti-glycan humoral responses after vaccination with PROSTVAC-VF
Data table header descriptions
ID
LINKER
CORE
SUGAR_RATIO
ORGANISM
SPOT_ID
Data table
ID
LINKER
CORE
SUGAR_RATIO
ORGANISM
SPOT_ID
2'FucLac
3 atom
BSA
7
Homo sapiens
Fuca1-2Galb1-4Glc-BSA
3'SLacNAc
14 atom
BSA
19
Homo sapiens
Neu5Aca2-3Galb1-4GlcNAc ? BSA
3'Sia-3-FL
3 atom
BSA
7
Homo sapiens
Neu5Aca2-3Galb1-4(Fuca1-3)Glc -BSA
6'Slac
APD
HSA
13
Homo sapiens
Neu5Aca2-6Galb1-4Glc-APD-HSA
Ac-A-Tn(Thr)-S-G - 05
hex
BSA
5
Homo sapiens
Ac-Ala-(GalNAca)Thr-Ser-Gly-Hex-BSA (muc4)
Ac-A-Tn(Thr)-S-G - 08
hex
BSA
8
Homo sapiens
Ac-Ala-(GalNAca)Thr-Ser-Gly-Hex-BSA (muc4)
Ac-A-Tn(Thr)-S-G - 23
hex
BSA
23
Homo sapiens
Ac-Ala-(GalNAca)Thr-Ser-Gly-Hex-BSA (muc4)
Ac-G-V-Tn(Thr)-S-A-G - 04
hex
BSA
4
Homo sapiens
Ac-Gly-Val-(GalNAca)Thr-Ser-Ala-Gly-Hex-BSA (muc1)
Ac-G-V-Tn(Thr)-S-A-G - 21
hex
BSA
21
Homo sapiens
Ac-Gly-Val-(GalNAca)Thr-Ser-Ala-Gly-Hex-BSA (muc1)
Ac-P-Tn(Thr)-T-G - 05
hex
BSA
5
Homo sapiens
Ac-Pro-(GalNAca)Thr-Thr-Gly-Hex-BSA (muc2)
Ac-P-Tn(Thr)-T-G - 08
hex
BSA
8
Homo sapiens
Ac-Pro-(GalNAca)Thr-Thr-Gly-Hex-BSA (muc2)
Ac-P-Tn(Thr)-T-G - 22
hex
BSA
22
Homo sapiens
Ac-Pro-(GalNAca)Thr-Thr-Gly-Hex-BSA (muc2)
Ac-S-S-S-G
hex
BSA
24
Homo sapiens
Ac-Ser-Ser-Ser-Gly-Hex BSA
Ac-S-TF(Ser)-S-G - 04
hex
BSA
4
Homo sapiens
AcSer-(Galb1-3GalNAca)Ser-Ser-Gly-Hex-BSA
Ac-S-TF(Ser)-S-G - 16
hex
BSA
16
Homo sapiens
AcSer-(Galb1-3GalNAca)Ser-Ser-Gly-Hex-BSA
Ac-S-TF(Ser)-S-G - 28
hex
BSA
28
Homo sapiens
AcSer-(Galb1-3GalNAca)Ser-Ser-Gly-Hex-BSA
Ac-S-Thr-S-A-G - 18
hex
BSA
18
Homo sapiens
AcSer-Thr-Ser-Ala-Gly-Hex-BSA
Ac-S-Tn(Ser)-S-G - 04
hex
BSA
4
Homo sapiens
AcSer-(GalNAca)Ser-Ser-Gly-Hex-BSA
Ac-S-Tn(Ser)-S-G - 22
hex
BSA
22
Homo sapiens
AcSer-(GalNAca)Ser-Ser-Gly-Hex-BSA
Ac-S-Tn(Ser)-S-G - 33
hex
BSA
33
Homo sapiens
AcSer-(GalNAca)Ser-Ser-Gly-Hex-BSA
Total number of rows: 220 Table truncated, full table size 16 Kbytes .
Supplementary data files not provided