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Status
Public on Sep 30, 2012
Title
Agilent-031749 Hp695 3 probes [Probe Name version]
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Helicobacter pylori NCTC 11637 = CCUG 17874 = ATCC 43504 = JCM 12093
Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Description
Arrays of this design have barcodes that begin with 16031749 or 2531749. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.
Submission date
Jul 19, 2012
Last update date
Sep 30, 2012
Contact name
David Scott
E-mail(s)
dscott@ucla.edu
Organization name
UCLA/VA GLAHS
Street address
11301 Wilshire Blvd
City
Los Angeles
State/province
CA
ZIP/Postal code
91302
Country
USA
Samples (22)
GSM970501 , GSM970502 , GSM970503 , GSM970504 , GSM970505 , GSM970506
GSM970507 ,
GSM970508 ,
GSM970509 ,
GSM970510 ,
GSM970511 ,
GSM970512 ,
GSM970513 ,
GSM970514 ,
GSM970515 ,
GSM970516 ,
GSM970517 ,
GSM970518 ,
GSM970519 ,
GSM970520 ,
GSM970521 ,
GSM970522
Series (1)
GSE39512
The relationship between inhibition of gastric acid secretion and eradication of Helicobacter pylori
Data table header descriptions
ID
ProbeName
SPOT_ID
Spot identifier
CONTROL_TYPE
Control type
ORF
Orf name
CHROMOSOMAL_LOCATION
Chromosomal Location
SEQUENCE
Sequence
Data table
ID
SPOT_ID
CONTROL_TYPE
ORF
CHROMOSOMAL_LOCATION
SEQUENCE
(+)E1A_r60_1
(+)E1A_r60_1
pos
(+)E1A_r60_3
(+)E1A_r60_3
pos
(+)E1A_r60_a104
(+)E1A_r60_a104
pos
(+)E1A_r60_a107
(+)E1A_r60_a107
pos
(+)E1A_r60_a135
(+)E1A_r60_a135
pos
(+)E1A_r60_a20
(+)E1A_r60_a20
pos
(+)E1A_r60_a22
(+)E1A_r60_a22
pos
(+)E1A_r60_a97
(+)E1A_r60_a97
pos
(+)E1A_r60_n11
(+)E1A_r60_n11
pos
(+)E1A_r60_n9
(+)E1A_r60_n9
pos
(+)eQC-39
(+)eQC-39
pos
(+)eQC-40
(+)eQC-40
pos
(+)eQC-41
(+)eQC-41
pos
(+)eQC-42
(+)eQC-42
pos
(-)3xSLv1
(-)3xSLv1
neg
CUST_1000_PI425913881
CUST_1000_PI425913881
FALSE
HP0345
unmapped
ATGGAAAATGATGTTAAAGAAGATCTAGAGCAAGCAAGACCAAAGTTA
CUST_1001_PI425913881
CUST_1001_PI425913881
FALSE
HP0346
unmapped
TGCTTGCACTATTGGGCTTTGGTTTGGAAGCGATGCAGCATTCAATTATATTGATGAATG
CUST_1002_PI425913881
CUST_1002_PI425913881
FALSE
HP0346
unmapped
GTTCTTGGATTGGCATTATTCTGTCAAGGGGGATTATAGCGAGCTTGCTCTTTTTGTAGC
CUST_1003_PI425913881
CUST_1003_PI425913881
FALSE
HP0346
unmapped
AGTGGATACCGATCTTTCTCAAAACGCAAAAATTTTAGACACTCTTGGCGATGAAGTGGC
CUST_1004_PI425913881
CUST_1004_PI425913881
FALSE
HP0347
unmapped
TCCTTTAGGCAAGCAATCAATCACGCTTGTTGAGCCTTTAAGCTATAACCCTTTTTTGGA
Total number of rows: 4820 Table truncated, full table size 588 Kbytes .
Supplementary file
Size
Download
File type/resource
GPL15831_031749_D_GEO_20101215.txt.gz
1.5 Mb
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TXT