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| Status |
Public on Apr 27, 2012 |
| Title |
Streptococcus pneumoniae whole genome expression array |
| Technology type |
in situ oligonucleotide |
| Distribution |
custom-commercial |
| Organism |
Streptococcus pneumoniae R6 |
| Manufacturer |
NimbleGen |
| Manufacture protocol |
NimbleGen Systems Inc.
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| Description |
Catalog Number: A6701-00-01, Design Name: 071112, Spne R6 EXP X4, Description: Streptococcus pneumoniae R6, Accession Numbers: NC_003098, Genes: 2037, Probes/Transcript: 17, Probes: 4 x 72,000, Replicates: 2
Nimblegen Expression Streptococcus pneumoniae R6 4X72K, Probe Length: 60mer, Number of Probes per, Target:2-7, Number of Replicate probe Sets per Array: 1-3, Feature Size: 16x16um, Array Size: 7.8x5.7mm, Slide size: 1x3 in.(25x76mm)
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| Submission date |
Apr 24, 2012 |
| Last update date |
Apr 27, 2012 |
| Contact name |
Heekuk Park |
| E-mail(s) |
bbagy81@gmail.com
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| Phone |
+82 2 822 5685
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| Fax |
+82 2 822 5685
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| Organization name |
Chung-Ang University College of Medicine
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| Department |
Department of Medical Microbiology
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| Lab |
Microbiology
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| Street address |
Heukseok-dong
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| City |
Seoul |
| ZIP/Postal code |
156-756 |
| Country |
South Korea |
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| Samples (4) |
GSM921270, GSM921271, GSM921272, GSM921273 |
| Series (1) |
| GSE37539 |
Expression analysis of strains Streptococcus pneumoniae KCTC 5080T, Streptococcus mitis KCTC 3556T, Streptococcus oralis KCTC 13048T, and Streptococcus pseudopneumoniae CCUG 49455T |
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| Data table header descriptions |
| ID |
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| ORF |
Entrez locus_tag name of the Gene name to which the indicated probe is directed. |
| FUNCTION |
Entrez function number for the Gene name to which the indicated probe is directed. |
| Data table |
| ID |
ORF |
FUNCTION |
| spr0320060100000320 |
spr0320 |
The type 2 capsule locus of Streptococcus pneumoniae |
| spr0963060100000963 |
spr0963 |
hypothetical protein |
| spr1586060100001584 |
spr1586 |
hypothetical protein |
| spr1102060100001101 |
spr1102 |
Uncharacterized restriction enzyme, interrupted-N |
| spr1727060100001725 |
spr1727 |
hypothetical protein |
| spr0552060100000552 |
spr0552 |
hypothetical protein |
| spr0807060100000807 |
spr0807 |
hypothetical protein |
| spr0322060100000322 |
spr0322 |
dTDP-glucose-4,6-dehydratase |
| spr0971060100000971 |
spr0971 |
ABC transporter membrane-spanning permease - macrolide efflux |
| spr0490060100000490 |
spr0490 |
hypothetical protein |
| spr0471060100000471 |
spr0471 |
hypothetical protein |
| spr0321060100000321 |
spr0321 |
The type 2 capsule locus of Streptococcus pneumoniae |
| spr1070060100001069 |
spr1070 |
PTS system, lactose-specific IIBC component |
| spr1585060100001583 |
spr1585 |
hypothetical protein |
| spr1189060100001188 |
spr1189 |
hypothetical protein |
| spr1191060100001190 |
spr1191 |
ABC transporter ATP-binding protein - oligopeptide transport |
| spr1081060100001080 |
spr1081 |
hypothetical protein |
| spr1071060100001070 |
spr1071 |
PTS system, lactose-specific IIA component |
| spr1101060100001100 |
spr1101 |
Uncharacterized restriction enzyme, interrupted-C |
| spr0561060100000561 |
spr0561 |
Cell wall-associated serine proteinase precursor PrtA |
Total number of rows: 1723
Table truncated, full table size 100 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GPL15485_071112_Spne_R6_EXP.ncd.gz |
237 b |
(ftp)(http) |
NCD |
| GPL15485_071112_Spne_R6_EXP.ndf.gz |
4.4 Mb |
(ftp)(http) |
NDF |
| GPL15485_071112_Spne_R6_EXP.ngd.gz |
90.5 Kb |
(ftp)(http) |
NGD |
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