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Platform GPL15018 Query DataSets for GPL15018
Status Public on Dec 15, 2011
Title Agilent-031181 Unrestricted_Human_miRNA_V16.0_Microarray 030840 (Feature Number version)
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer Agilent Technologies
Manufacture protocol see manufacturer's web site at http://www.agilent.com/
 
Description Human and human viral miRNAs

Arrays of this design have barcodes that begin with 16031181 or 2531181.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.

 
Submission date Dec 15, 2011
Last update date Oct 29, 2018
Organization Agilent Technologies
E-mail(s) cag_sales-na@agilent.com
Phone 877-424-4536
URL http://www.agilent.com
Department
Street address
City Palo Alto
State/province CA
ZIP/Postal code 94304
Country USA
 
Samples (645) GSM1015144, GSM1015145, GSM1015146, GSM1015147, GSM1015148, GSM1015149 
Series (36)
GSE41337 The microRNA profile of human periodontal ligament-derived stem cells subjected to dynamic tensile strain
GSE42072 Clinical Utility of Circulating MicroRNA Signatures for Breast Cancer Diagnosis (Gene expression)
GSE42128 Clinical Utility of Circulating MicroRNA Signatures for Breast Cancer Diagnosis
Relations
Alternative to GPL15019
Alternative to GPL15159
Alternative to GPL16770 (miRNA ID version)
Alternative to GPL22934

Data table header descriptions
ID Agilent feature number
COL Column
ROW Row
SPOT_ID Spot identifier
CONTROL_TYPE Control type
GENE_SYMBOL Gene Symbol
GENE_NAME Gene Name
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location
DESCRIPTION Description

Data table
ID COL ROW SPOT_ID CONTROL_TYPE GENE_SYMBOL GENE_NAME ACCESSION_STRING CHROMOSOMAL_LOCATION DESCRIPTION
1 192 328 miRNABrightCorner30 pos NA
2 192 326 Blank pos NA
3 192 324 Blank pos NA
4 192 322 Blank pos NA
5 192 320 Blank pos NA
6 192 318 Blank pos NA
7 192 316 Blank pos NA
8 192 314 Blank pos NA
9 192 312 Blank pos NA
10 192 310 Blank pos NA
11 192 308 A_25_P00013722 FALSE ebv-miR-BART1-3p ebv-miR-BART1-3p mir|ebv-miR-BART1-3p|mir|MIMAT0003390 HHV507799:000139391-000139408 NA
12 192 306 A_25_P00015543 FALSE hsa-miR-4256 hsa-miR-4256 mir|hsa-miR-4256|mir|MIMAT0016877 chr1:113004419-113004405 NA
13 192 304 A_25_P00013773 FALSE ebv-miR-BART17-3p ebv-miR-BART17-3p mir|ebv-miR-BART17-3p|mir|MIMAT0003716 HHV507799:000139960-000139975 NA
14 192 302 A_25_P00015229 FALSE hsa-miR-1279 hsa-miR-1279 mir|hsa-miR-1279|mir|MIMAT0005937 chr12:69666967-69666952 NA
15 192 300 NA ignore NA
16 192 298 A_25_P00016018 FALSE hsa-miR-3616-5p hsa-miR-3616-5p mir|hsa-miR-3616-5p|mir|MIMAT0017995 chr20:45795631-45795648 NA
17 192 296 A_25_P00011991 FALSE hsa-miR-17 hsa-miR-17 mir|hsa-miR-17|mir|MIMAT0000070|mir|hsa-miR-106a|mir|MIMAT0000103 chr13:092002880-092002894,chrX:133304262-133304248 NA
18 192 294 NA ignore NA
19 192 292 A_25_P00015101 FALSE hsa-miR-1286 hsa-miR-1286 mir|hsa-miR-1286|mir|MIMAT0005877 chr22:20236723-20236709 NA
20 192 290 A_25_P00010432 FALSE hsa-miR-484 hsa-miR-484 mir|hsa-miR-484|mir|MIMAT0002174 chr16:15737166-15737179 NA

Total number of rows: 62976

Table truncated, full table size 7308 Kbytes.




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Supplementary data files not provided

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