NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Platform GPL14357 Query DataSets for GPL14357
Status Public on Dec 31, 2011
Title NimbleGen Eucalyptus 386K array v.1.0.
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Eucalyptus spp. mixed library
Manufacturer NimbleGen
Manufacture protocol High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at http://www.nimblegen.com/.
 
Description NimbleGen design name 2006-02-21_Eucalyptus_50mer, NimbleGen design ID 3112, NimbleGen Order ID 3369. Standard expression design for 21,442 ESTs from Eucalyptus spp. with nine 50-mer probes per EST. Each probe replicated 2 times on chip (2 blocks per chip).
 
Submission date Aug 27, 2011
Last update date Dec 31, 2011
Contact name Giancarlo Pasquali
E-mail(s) pasquali@cbiot.ufrgs.br
Phone +55-51-33089410
Fax +55-51-33087309
URL http://www.ufrgs.br/cbiot
Organization name Universidade Federal do Rio Grande do Sul
Department Centro de Biotecnologia
Lab Plant Molecular Biology
Street address Av. Bento Gonçalves, 9500 - Pr. 43.431 - Lab. 212
City Porto Alegre
State/province RS
ZIP/Postal code 91.501-970
Country Brazil
 
Samples (10) GSM786737, GSM786738, GSM786739, GSM786740, GSM786741, GSM786742 
Series (1)
GSE31696 Genolyptus microarray studies of Eucalyptus grandis and Eucalyptus globulus leaf and xylem tissues

Data table header descriptions
ID
Genolyptus Genolyptus (Sistema Genoma) sequence code after clustering in February 2006
SEQUENCE Genolyptus EST cluster consensus sequence or EST singleton sequence from which oligonucleotides were designed at NimbleGen
Annotation Best BLASTn hit following BLASTx_NR annotation agains SwissProt
SPOT_ID

Data table
ID Genolyptus SEQUENCE Annotation SPOT_ID
LYPTUS00S00000001 CL1Contig1 ATTAGGTACGCCCTGCGGTACCGGTTTCCGGATTCCCGCGTCGACCCACGCGTCCGCCCACGCGTCCGTCCCTTTCCATTGTTGCGTTTAAGCCCTCCAATTTTCTTTTGGCGTCCCGTTTTTGGGGCTCCCTTGAAGATCTCCTCTTCATTTCGGGATTTCCTGCCTTCGCCGCGCCATTTGAAGTTCTTTTTCTGAGAGAAGAATTTAGACATGGCTGATCGCATGTTGACTCGAAGCCACAGCCTTCGCGAGCGTTTGGACGAGACCCTCTCTGCTAACCGCAACGATATTGTGGCCTTCCTTTCAAGGGTTGAAGCCAAGGGCAAAGGCATCTTGCAGCGCCACCAGATTTTTGCTGAGTTTGAGGCCATCTCTGAGGAGAGCAGAGCAAAGCTTCTTGATGGGGCCTTTGGTGAAGTCCTCAAATCCACTCAGGAAGCGATTGTGTCGCCTCCATGGGTTGCTCTTGCTGTTCGTCCAAGGCCGGGCGTGTGGGAGCACATCCGTGTGAACGTCCATGCGCTTGTTCTTGAGCAATTGGAGGTTGCTGAGTATCTGCACTTCAAAGAAGAGCTTGCTGATGGAAGCTTGAATGGTAACTTTGTGCTTGAGCTTGACTTTGAGCCATTCACTGCCTCTTTTCCGCGCCCGACTCTTTCCAAGTCTATTGGCAATGGCGTCGAGTTTCTCAATCGCCATCTCTCCGCTAAGCT acc=P13708 [Sucrose synthase (Sucrose-UDP glucosyltransferase) (Nodulin-100)] [evalue=2e-74]
LYPTUS00S00000002 CL1Contig14 AAATGGTCACCTGCAGTCCGGTCCGGAATTCTTCGGTCGACCCACGCGTCCGCGGAGAACCCGGATGGTGTTCCGGACAAATGTTGCTCCAAGGAGTACTACCCGAGCCCGGAAGGCGACTTCGGGCCCGGCGGCACCGAGATGGCGGGCGCGAAGAAGGTGAATTTGAGGGTCGAGATTGATACTTCGCCGCCGTTCGGGTCGGTGAAGGAGGCGGTGACCCATTTCGAAGGAAGTGGATCTTGGTTCTCGCTCCACGGCCTTGGACTTAGACATTCTTATCTTCAGGGAATTGGAGGAGTTGACTTAAAGAAAGTGGAAGAACAGACACTAGAATTGGAGAAGAATCTGATTGTGAAAGAACTGGAAACGCTTGATGTATTAGAAGAACTGGGAACAACCAAAAGGATTGTGGAAGATTTGAAGTGGCAGCTCCAGCATGAAGCGCTGAAATCCATGACAGTCCCCGAACCACAAGAACGGATGCCAACTCCTATGAATGAGGACATAAAAAAGGAAAATCATAAGTATATTCTGAGCAATCACGAGCAAGCCGTGGGAACTTCCAGCCTGTGCCCTTCTCCATCTCCTGATTTGATCCTGATGGAGTTGAATCAAGCGAAGTTGAACCTGGGTAAAACCATACATGAGCTTGGTCTGATTCAAACATCCGTTGAGTCTCTCAATAAGAAAATAAAGAAAGAGAAAGCCTCGCTTGAGAAAACCCGCCAGAGGCTGACATCAAAGCCCGCAGGCGCATCATATCTGAAGGAAGAACCAGAACGGCAAAGGACGAAGCCGCTATTGGTGGACGATTCTGACCTCTTTGGGAACTGCAAAAATATCATGGAATTACTTCCAGATGGGAATTACAGGCCTGAGCAATATAGCGAGGTCGATGAAGCTAGAAACTTTGGAGTATCTAGAGCTGTTCCGTCAGTCCAGCAGATGAATGCTAGCAAGAAGACTGCTGAGATGAGATTAATTGCAGCCAGGAAGATGGAGGAAGCAGCTAGGGCTGCAGAGGCAGTTGCACTTGCCGAGATAAAGGCTTTATCAAGCAATGAAGAATTTGTAGCAAGAAGACAGACCGAAGGTCGACGGGTTGCTCTAAGTCAGATTGCTTAATGAACTGAGAGAAGATCTAACATTCCCAGCCAAGGCT no hit
LYPTUS00S00000003 CL1Contig15 GTCCGCCCACGCGTCCGTCCACGCGTCCGCCCACGCGTCCGAAGCAAATGCCACTTCCAGTTGTTTTTACTCCTCTTCTTTTGGTGCAAGGAGCTGGACTCTTGTTTGCTGCATATAGATTGATAGAAAAGATTGTCTTTATGTTGCACAGTGGAGCTTGTTCTAGCAATTACTCCCTGATCTCATTGAAAATTCGTGATTGCTTTGGATTTTTGCATCATGGGTCACGGTTGTTAGGTTGGTGGTCGATAGATGAAGCCAGCCAACAGGAACGAGCTAGACTTTTCTGTGGTGGCTCTTCTGGCTACAATACTTTTTCGCCTGATGTTGTAAAGAAGTTGCCTAAGTCAGATCTTGTTGAGGAGATATGGAGATTACAAGCTGCACTGAGTGAGCAGACAGAAATAACAAAAGCAGCCAGCAAGAGTATGAGAGACTTCAAAATGAGAAGATCCTTTGTAGAGTTTGCTTCGAAGATCAAATCAATGTGGTCATGCTTCCCTGCCGGCATCATGCCCTCTGCAGGTCTTGCTGNCACAAGTGTAAAAAGTGTCCCATCTGCCGCGTCTCCATCGAAGGGAGGGTGCCTGTGGCTGTACAT acc=O62640 [Putative inhibitor of apoptosis] [evalue=2e-09]
LYPTUS00S00000004 GL-XY-001&&AF-029&&AF-EUGL-XY-001-029_D07_.g_042.ab1 CGGTCCGGATTCCCGGGTCGACCCACGCGTCCGCCGAAATCTTTTCTCCTCTCTAACTGAAGCAGCAATCACCAAATTCTCTATACCAGAATTTCTTCTGTTATTCTTGCTTTTCAACGCCTTCGTTTTTCGAGAAACTAGTTGGAAATCATCATTTTCCTATGATGAAGAATCAACTTGTACTTCCATTTTCTTGCATCGCAATAATATTCCTCCTCCACATCGCCCCCATTACCAGCCAAGGTCCGGCCGGGGCTCCGGCTGCCCCTGCCAGCCCGACCAACGTCACCGCAATCCTCTCAGTTGAGCAATCAGAAGTCGAACCAGGGCTTCACCATATTTGCGCCGACTGACAATGCGTTCGCTAGTCTCAAATCGGGCACGCTGAACATGCTTTCCGATCAAGAGAAGACCCAGCTAGTGCAGTTCCACATCATCCCTTCCGTCATCTCGCTCACGCAGTTCTCGACCATCAGCAACCCACTGCGGACCCAAGCTGGCAACACTGACAACGGCCAGTTTCCGCTCAACGTGACCACATCGGGGAATCAAGTGAACGTAACGACTGGGGTTGTGGCCGCAAGCGTCGACAACGCAATAACTAGTAACAGCAAATTGGCGATTTATCAGGTCGATCAGGTGCTGCTTCCGTTGGCCATGTTCGGGACGCCGGCACCAGCTCCAGCACCGGGGGCACCCAAGAAGGAAGTGCCGGTTCCATCGCGTGCCCCATCTGGATCGGACAGTGCCCCTGTCGATTCCTCCGATGCAGTTGCCAATACGTTTAACTCAAGGACATTGGCTCCGTACGTCGTTGCTGCTACTTTGGGTGGAGTGCTGCTGTTTTAAAACCGAATTTTTGTATGATACATGAGGATGGTCGGTCTCATGATTTTGTTTTCTTTCGCATCTTGCGTTTCAGTTTCTTTTGCAATGAGCTGTATCATTCATTGAGTTTATTCCTAATGAAAATCATGCTTTGAGAAGGAAC acc=Q9SJ81 [Fasciclin-like arabinogalactan protein 7 precursor] [evalue=1e-13]
LYPTUS00S00000005 CL1Contig18 TCCGCACACACACATACACTCACACACGCACACAAACCAACCCGATCATTGTCTGAATCATCGCCAGTTTCATCTACCGACGATGTCTGTGATCTCTCAGCTCATGGGGAACGAGATACTGGACCCCTTCCTGTCGATGGTCAACAAGTGCCCGGTGCTCAACGCACCGACCGACTGGAAGGAGACCCCGGAGGCCCACATGTTCATTGTCGACCTCCCGGGGCTGAAGAAGGGCGAGGGCGAGGAGAAGTGGCACAGGGTGGAGCGCTTCCGGGGCAAGTTCTCGAGGCGGGTCAGGCTGCCGAGGAACGCGAAGAGGGAGGGG acc=P13853 [17.6 kDa class I heat shock protein (HSP 17.6)] [evalue=2e-13]
LYPTUS00S00000006 CL1Contig19 CACGCGTCCGCCTCGATCAGTTTTCGCAAGAGCAATGGAGGGCATCAAGCAGTCGCTTCTGGTGGCAGTGCTCGCGGCGACGCTGCTGCTGTCGCCCCTCGTCGTGAGCGGGGACGACGACGACACAGGGCCGGTGAAGCCGGTGGTGAAGATAGTGAAGGGCAAGAAGTTGTGCACCAAGGGGTGGGAGTGTAAAAAGCTGTCGCAGTACTGCTGCAACCAGACCATCTCCGACTACTTCCAGGCGTACCAGTTCGAGAACCTCTTCTCCCAGAGGAACTCCCCCGTGGCCCACGCGGCCGGCTTCTGGGCCATGTCGGGGAGCAAACATCCTGCGGGTATGGAGTGGCGACCGGAGGGCCGTTGCGTGGGGG no hit
LYPTUS00S00000007 CL1Contig20 CACGCGTCCGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGTTGGCCTTCGAAATTATCGGTTCTTCTTCATGTTTGTGTTCTCGACGACTCTCCTTTGTATATTTGTCTTTGCGTTCTGCTGGGTCTACATCAGGAGAATCGCGGGATCAGAGCATACAAACATCTGGAAAGCGATGATCAAGACCCCTGCCTCAATCGTCTTAATAGTCTACACTTTTATTTCAATGTGGTTTGTTGGTGGCCTCACTGCTTTCCATTTATATCTCATCAGTACAAATCAGACCACATATGAGAACTTCCGATATAGATATGATAGGCGAGCCAACCCCTACAACAGAGGAGTGGTTGAGAATTTCNAGGAGATATTCTTCACCAGCATCCCCGTATCCAGGAAACATTTTAGGGCGAAGTTACCT acc=Q8IZN3 [Zinc finger DHHC domain containing protein 14 (NEW1 domain containing protein) (NEW1CP)] [evalue=2e-17]
LYPTUS00S00000008 CL1Contig22 CGGTCCGGATTCCCGGGTCGACCCACGCGTCCGGAGCAAGTACCGGTCAAGTGTGTCGTCTGGATAGTTGGCATGTTGTGATGTCCACACCAATGGAAGAAGGAATTAAATTACCTTATTCTCTAAAGACCACTGAAGATTGTGCTCTTGATGAGGGTTTGGAATATGAAGGGCAATTGCCTGAGAAATCCAGCTGCTTTGGAGGAGTGTTTTACAATTACTTCAGTATAGGAATGGATGCACAGGTCGCTTACGGCTTTCACCATTTACGCGATGAAAAACCTTATCTTGCTAGTGGCCCAATTGCAAATAAGCTGATCTACTCTGGTTATACATGCAGCCAAGGGTGGTTTTTTACGCCTTGCACAAGTGATCCAAGTCTTAGGGGACTAAAGAACATTCTCAGGATACACGTTAAGAAGGTCAACTGCACAGAATGGGAGAAGGTTCCTGTGCCTTCCAGTGTCAGGGCCATAGTAGCTCTGAATCTTCATAACTATGCTAGTGGAAGGAATCCATGGGGCAATTTGAAGCCAGATTATCTAGAAAAGAGAGGATTTGTTGAGGCCCATGTGGATGATGGTCTGCTTGAAATATTTGGCTTAAAGCAAGCATGGCATGCCTCATTTGTCATGGTTGAATTGATATCTGCGAAGCACATTGCCCAGGCTGCTGCTGTTCGGCTGGAAATCAGGGGCGGGGAGTGGAACAACGCATACATGCAGATGGATGGAGAGCCCTGGAAACAGCCGCTGAGCAAGGATTATTCAACTTTTGTGGAAATCAAGAGGGTGCCCTTCTGCTCGTCAATGATCCGGGGAGAGTGAAACAGCGGTAGGATATTGCAGTAATGGGTCCATGGAATTGGTGTCTATATTTTATTTATTTGTACTGGGTCATGTACCATAGTCATAGCTCAGGTTTAGAATCTTAATGTGATTGCTGTAACTGTATATTGTCGATTGGTTGTATTAATGTAATGTTGAGTTTGTTTTAAAAAGAAAAAGAAAACCATGCCAACATTACTACTGATGAAAAGACAAAACTACA "acc=P52429 [Diacylglycerol kinase, epsilon (Diglyceride kinase) (DGK-epsilon) (DAG kinase epsilon)] [evalue=5e-14]"
LYPTUS00S00000009 CL1Contig591 AATGGTCACCTGCAGGTACGGTCCGGTAATCCCGGGTCGACCCACGCGTCCGGAGCGAGATCAGATAGAGAGAGAGAGAAGATGGGAGGAGGAGGCGGACATGGAGGGAGCACGACCTACAAGGGGATGTCCCTGCACCACCCCAAGCGGTGGCACACCGTCACCGGCAAGGGGCTGTGCGCCGTCATGTGGTTTTGGGTCCTTTACAGAGCTAAGCAAGATGGGCCGGTAGTACTGGGTTGGCGACATCCTTGGGAGGGTCATGAAGATCACTCCCATGGCCATGAACATGATCACGAGACATCCCATTGAAAAGCCAGAAAGGGATAACACAAAAAGGCCAGGGTGTTCTTATCGCAGTGTATCGTGGATTATCTGTGTTCCTTTGAGTTCAAATAAAGATCTCTGTGAGATTTATGATCTCACAACAGCAAATCTGTTAGCTTGTAAGGATGTTAAAACA no hit
LYPTUS00S00000010 CL1Contig1426 NNCCGCAAANNNNNNNAAATGGTCACCTGCAGGTACGGTCCGGACTCCCGGGTCGACCCACGGGTCCGGATTCCCGGGTCGACCCACGCGTCCGGGAAGCTTAGGGAAGAAGAATGCATAACCCTCCACCACCCCCCGATCCTCACCACCCCCCGCCCCACGCGCCGCCTCCCGGTCCTCCTCATCCAGCACCACCTCCTCCTCATCCCGAGCCGCCTCCTCCTCATGGCCACCCTCCCCCTCCCGGCCCACACGCACCACCTCCAGGCCCTCCTGAACCCCACAAACCTGCCCCTCCTCATCATCACCCTCACCCTCCCCCATGAGCCAATCGACTAGATCAAATCCGAAATAAGTGTGTGTTTGTGTAAGTTTGTGTTTAAATTTGGGCTGTTTATGTATAATTTTCTGTACTATGCTTTGTCAGTGGCATACTGTTATCGTGCTGCTTCATCTGACAACATGTCACACAAGATGGCTAGAGTTGTCCCGGACCTCACCTGACGTTCCGGATCTTCTATTACTGCGTCTCTGCTTTTATCACTTCATATGTACACGTGCATGATGCAATACAACTACAATTAAATAAGTGTTGCCATTGATGCTTCTACTTGTCCCCATTTTGCCTTTTCTTTTGTATTACAAGAAGGGCTGAAGCATAATGAAGTTATGGTTCGAAGCAACTGGGGAGCTTTGAATCTTGATTAATACA no hit
LYPTUS00S00000011 CL1Contig23 AATGGTCACCTGCAGGTCCGGTCCGGTACTTCCGGGTCGACCCACGCGTCCGATTATTTTCTCCTCCATTTTCCCCGCACTTTCCCGGGAAAACTCCAGCCAGAAAAACCGCCACCCACCACCGCCGCCACCGCCGCCACCGCCGCAGCCACCGCCGGAGAGCAAGAGCGCGAGAGAGAGACACAGAGGTTAGCGAAGATGAGGGAGATCCTGCACATCCAGGGCGGCCAGTGCGGCAACCAGATCGGGGCCAAGTTCTGGGAGGTGATCTGCGACGAGCACGGCATCGACCCCACCGGCAAGTACAACGGCGACTCCGAGCTCCAGCTCGAGCGCATCAATGTCTACTACAACGAGGCCAGCGGGGGGCGCTACGTCCCGCGCGCCGTCCTCATGGATCTCGAGCCCGGCACCATGGACTCCGTCAGATCCGGGCCCTTCGGCCAGATCTTCAGGCCCGACAACTTCGTCTTCGGCCAGTCCGGCGCCGGCAACAACTGGGCCAAGGGACACTACACCGAGGGCGCCGAGCTGATCGACGCCGTCCTCGACGTCGTGAGGAAGGAGGCCGAGAACTGCGATTGCCTGCAGGGATTTCAAGTTTGCCATTCTCTCGGTGGAGGAACTGGCTCTGGCATGGGAACACTCCTTATTTCCAAGATCAGGGAGGAGTATCCAGATCGAATGATGCTTACATTCTCAGTCTTTCCTTCTCCCAAGGTGTCCGATACGGTGGTTGAGCCTTACAATGCAACTCTTTCTGTGCATCAGCTTGTTGAGAATGCTGATGAATGTATGGTGCTCGACAATGAAGCTCTCTACGACATCTGCTTCCGTACTCTCAAGCTTGCCACCCCTACCTTTGGTGATCTCAATCATCTCATCTCTGCTACCATGAGTGGTGTGACATGTTGTCTTCGGTTCCCTGGTCAACTTAACTCTGACCTTCGGAAGCTTGCTGTCAACCTTATCCCTTTCCCACGGCTCCACTTTTTTATGGTTGGATTTGCACCACTCACATCCAGGGGATCTCAGCAATATCGTGCGTTGACCGTTCCGGAATTGACCCAACAGATGTGGGATGCCAAGAACATGATGTGTGCGGCTGACCCACGTCATGGCCGCTACTTGACTGCCTCTGCCATGTTCCGTGGAAAGATGAGCACCAAGGAAGTTGATGAGCAGATGATAAATGTTCAGAACAAGAACTCGTCATACTTCGTTGAGTGGATTCCTAACAATGTGAAGTCTAGCGTATGTGACATCCCGCCCAAGGGTTTGAAGATGGCATCGACCTTCATCGGCAATTCAACCTCAATCCAGGAGATGTTCAGGCGAGTGAGCGAGCAGTTTACTGCTATGTTTAGGCGCAAGGCTTTCTTGCACTGGTACACAGGCGAGGGAATGGATGAGATGGAATTCACCGAGGCTGAAAGCAACATGAACGATTTGGTGGCCGAGTACCAGCAATACCAGGATGCTACTGCTGATGATGAGGAGGAGTACGAGGAGGATGAGGAGGAGGATTTGGTGGAGGTTCATGCTTGAGGTGTGGTTTTTTCTGTCCTGGTACTTGTCGCCTGCTCTGAACAGAGTTTATGTGATGTTGTGAAATTATCATTTAGATTGCTTTCCCATCTGTAATTCGTGGTTCATTATTGTTTTGCAATTCGGTGACTTGATCTTCTGCTGTTGTGGAATCATCATGGTTGTTCCTATTAAGTAAATGAAGGTATTGTTGGAAGCTAGAGACACTTTTATGCTTTATATATGATTGATGCTGGGCATTATTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGGGGGGCCCGTTTTAAAGGACCCAATTTTACGCCCGCGGGGTGGGAAGGTAAAATTTTTTTTTTGGGGCCCCCAAAATAAATTCCCGGGGCCGGGTTTTAACACCGGGGGGGGGGGAAAACCCCGGGGGTACCCCAATTAAAGGGCTTGGGAAAAAACCCCCTTTTCCCAAGGGGGGAAAAAAAAAAAAAGGCCCCCCCCAATCCCCTTTCCAAAAATTGGCCCCCCCTAAAGGGGAAAGGGGCCCCCCCCTTTAACGCCCCTTTAGCCGGGGGGGGGGG acc=Q6VAF7 [Tubulin beta-5 chain (Beta-5 tubulin)] [evalue=0.0]
LYPTUS00S00000012 CL1Contig756 CCCGGGTCGACCCCGCGTCCGCTCTCTTCAAGCAAGACTCGCTCCTCTCTGCCTCGCTCGCCTGCTAGCCCAACGACCATGTCGCTCGTGGCGAACGAGGAGTTCCAGCACATCCTGCGTGTGCTGAACACCAACGTCGATGGGAAGCAGAAGATCATGTTCGCCCTCACCTCCATCAAGGGTATCGGCCGCCGCTTCGCCAACATCGTCTGCAAGAAGGCCGACGTCGACATGAACAAGAGGGCTGGTGAATTGACTGCTGCTGAGCTAGACAACCTCATGGTCATTGTTGCCAACCCACGCCAATTTAAGATTCCAGACTGGTTTTTGAATAGAAAGAAGGATTACAAGGATGGAAAGTACTCTCAGGTTGTCTCGAACGCATTGGACATGAAGCTGAGAGATGATTTGGAGAGGTTGAAGAAGATCAGGAACCACCGTGGTTTGAGGCACTACTGGGGCCTGCGTGTTCGTGGCCAGCACACAAAGACTACTGGACGTAGAGGAAAAACTGTTGGTGTCTCCAAGAAGCGTTGAGTTCTTATTACTTTTAATTATGGGCGTTACATTCAATGTCTTTGGGGTAGTGTTTTTTGTTTGATCGTCAAGTTTAAAGTTCCTTGCGTGGACTCTGATACAGTTATAGCTCAAGGTTATTTCCTTGCCTTAGTTGTACGATGTGCTTTGCCTGGCATGATTGCTGAAATGTTAGTGAAGTAAAGCGGATCAAAGTTTAAGAGATAATCAGTTTCATTAAGCAAGCAATGAGAGGTTGGGACAGTTTTGGTTTTGTTGTTGAAATGATAATGTTATTCGTGCGACTTATTACCCGTTGAGTTTGTTGGGGA acc=P34788 [40S ribosomal protein S18] [evalue=2e-72]
LYPTUS00S00000013 CL1Contig219 GTCGACCCACGCGTCCGCGGACGCGTGGGCGGACGAGAGGGTTTGCAAATATCCGCCGTAGGAGCCGCCTCTCTGCGCCACCACCAGGGAACCCTCGTCTCCTCCAGCCATGGCCGTCGGGAAGAACAAGAGGATCTCGAAGGGGAAGAAGGGTGGGAAGAAGAAGGCGGTCGATCCGTTCGCGAAGAAGGACTGGTACGATATCAAGGCGCCGTCCGTGTTCACCGTCAAGAACGTGGGCAAGACACTCGTTTCTCGTACTCAGGGTACAAAGATTGCTTCAGAAGGTCTCAAGCATAGAGTGTTTGAGACATCGCTTGCTGACCTTCAAGGTGATGAGGACCACTCCTACAGGAAGATCCGTTTGAGATGTGAAGATGTCCAGGGTAGAAATGTCCTGACTAATTTCTGGGGCATGAACTTTACAACTGATAAGCTGAGGTCCTTGGTGAGGAAATGGCAAACTTTGATTGAAGCCCATGTTGATGTCAAGACAACAGATAATTACACATTGAGGATGTTTTGCATTGGTTTCACTAAGAGACGTCCTAACCAAGTCAAGAGGACCTGCTATGCTCAGTCTAGCCAGATTAGACAGATACGTAGGAAGATGAGGGAAATCATGGTAAACCAGGCAACATCTTGTGATTTGAAAGAGTTGGTCCGCAAGTTCATTCCAGAATCAATTGGAAAGGAGATTGAAAAGGCAACATCAAGCATCTATCCCCTACAGAATGTGTTCATCCGGAAAGTGAAGATCTTGAAAGCTCCTAAGTTTGACCTTGGGAAGTTGATGGAGGTTCATGGAGATTATTCGGAAGATATTGGTGTGAAGCTGGACAGGCCAGCTGATGAAACAGTGGCAGAGGCGCCTACCGAGGTTATTGGAGCTTGAATGTAGAGTGACTGAGATGCTGAGAATGTGTCCTTTTGTGAGAGTTACATTCCATTTGAAGGGAGGTTCTGTTTGTGAACCTGCCGAAAAATTTTCTTTTATGCACCTTTTGACTGTTTCATCAAGGAAGAGAAGACAATTTTGTTCCTTAATTTTGTAGACACCCTTAGATTTTGTCGACAGCCATCTAAATTATGGGTAATTGGTTGTTTGTTTN acc=P33444 [40S ribosomal protein S3a (CYC07 protein)] [evalue=1e-123]
LYPTUS00S00000014 CL1Contig700 CACGCGTCCGCACAGAGCATCAAAAACACAACCCCCTTCTCCTTCCCTCCTCCTCCTCTTCTCCTTCCGCCTCCTGAGGAAGAAGGGTCCGAGAGATTGTTAGCTTAGGTACCCTAGAAACCGTCCAATCCCACCTCCCCCTCCCAACCACAACGAACGACGACGAACGGCGGCGTCGGAGGAAGCAAGAAAGATTTTAAGTTTACGAGTCGCTGGACTCGAAGATCAAGAGCCAGGTCGCGGCGTCGGCGTCGGGCGACATGGTCGTCTGCGACGGGACGCAGCGGCTGGGCCCGGACCCGGAGATGGTCCCCAAGCAGGTCCGGATCGTGGATCTGAGGTCCCCGGCGCCGACGCCGGCGGCGGGGAGGAGGAGGTGCGACATGTACGCCGGATCGGCGTTCGCGGTGTCGCCGGAGCCGAGCTCCCTCCCCCTCCCGTCGTTCTCGAAGAAGAAGCACGTCTCCTTCGACGACTCGGCGACCAGAGATCTCCGGAGGCTGCTGCGTCTCGACTGAGGAAAGTTCCTCGACCGAAGAAGAAGACCCGTTTCGCTAGATCCGAGCCCGAGCCCGGATCAGACTCTCTTCCCTCTCTTCTTTCTACGTAGGTCCCTTGTTTCGTCGCCGGAGCATTTTCTTCCGATATCCCGGAGGTCAGATCGCAGCCGCGAGTTTTTTGAAAAGCGGGTGGGATTGGATGGATCTCTATATCGGAGAAATTGGCTTGGGGGACGATTCAGTAAATTTGCAGTCTTCTTTCTTCCTCCTCCTCCTCCTCCTCCTTCGGTGATGTGGTCTTTGGCTAGATCTTCACATCATCTGTATCATTATATCTTTTCTATCTTGTGGGTGGGTCTTGTGGGGTGACGTTATTGTAATTTGGGGTTGATGGGTTATCTTCTTTAGGGTCTTGTAGCTTGTAGTTGAAGTGGGAAAGGAATTAAAATAAAGGCGAGAAGAAAAATGAAAAAGAGAAGAGATGGGGGTTGAGTTCGAGTTTGAGTTTGTAACGAGTTTGGGGAAAATTAGGTTGTTGTTTGGTTATAGTAGGGGAGGAGGGTGTTGTTGTCTAAGGTGTTAAGGTGGTACAATGTTTTGATTATGACTTTATCACAAGGATTGCTTTGCGTTTAGTTGATTCGCCTGTTTGAATACTTAGCTTTTTATTCCCTTAAAATTGTTTTTTAGGGTTTAAACGTCAATGTCACTTTGTCTTGTTTGC no hit
LYPTUS00S00000015 CL1Contig150 CCCGGGTCGACCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGGAACGACGACGGATCCGCCTTCGTGGTGTGGAACCCCACCGTCTTCGCGCGCGATCTGCTCCCCAAGTATTTCAAGCACAACAACTTCTCCAGCTTCGTCAGGCAGCTCAACACCTACGGATTTCGGAAACTCGTGCCCGATCGGTGGGAGTTCTCCAACGATTGCTTCCGCAGGGGCGAGAAGCGGCTCCTGTGCGAAATCCAGCGCCGGAAGGTCTCCCCCTCGCCGACGGCCGCGGCGGTGGCGGTCGTCCCGGATTCCGTGGCGACCCTGCCTACGGCGATCCTGACGGCGATGCCGGTGATTTCGCCCTCGAGCTCGGGAGATGAGCAAGTGATGTCGTCGCAGCACTCCTCGCCGCCGTCCGCCTGCGGCCAGAACTGCACGGCCGAGATCATGGACGAGAACGAGCGGCTGAGGAAAGAGAACGCGTTCCTCAGCCGCGAGCTGACTCAGATGAAGAGCCTGTGCAACAACATCCTGTCCCTGATGTCGGGCTACGCCCCGAACGGGCGGCCGCAGGAGGCCAGTTCCCGCCCGGTGGCGAGGGCGCTCGACTTGATGCCAGTGAAGCGGCCGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGACGGCGACGACGAAGAGGAGGAGGAGGAGGAAGACGAGGAAGAGGATGGAGAGGGGAGCCCGAAGCTGTTCGGCGTGGCGTTGGGGATGAAGCGCGGGAGGGAAATCAGAGAAGGGGAGGTGGCGGTGATGTCGGGGTCCGACGCCATGCTGCGGCTGCAGCAACCCGGTTCCGGCGGCGTGAAATTCGAGCCGTCGGATGGGGATCAGAGGGCGATCTCCTTCCCCTCCGGGATAGCTTAGTTACTGTAGAAGTATGATTAATTATCGGCGTAAGAACACAGAATGTGTGAAAGCCAAGAAGAGAATATCCCCCCAATGTTCGTTAGCGGTTAGCGGTTAGCTCTGTAATGTATCTTGTGTACTACTCTGCATGAATCAACTTCAGCAATTTTTCT acc=Q9T0D3 [Heat shock factor protein 7 (HSF 7) (Heat shock transcription factor 7) (HSTF 7)] [evalue=3e-51]
LYPTUS00S00000016 CL1Contig552 GTATGAAGAAGACGCATCTTTTTATCCTCCGAATGGCTAACAGATTCAAAATGTTGTTTTAATATAGGGGGGTGCTTTACGCCGCTCGCATATGTGTAGGATTACAACGTCGTGACTGGGAAAACACTGATGGCGCCCGATGGAGTCTTATGTGCTGTTCCGCTCTTGTGTGATGGAAGCGGTCAACCTGCTTGGGCCATCCCTCGATGCGCGGGTCAGTTTCTCGGCCAAGATGGGCCGGATTGATGGATATCCACCGCCAAAGGGTTTGTTGTGTATGTCCTGTTGGTACGTAGTGAACCGATGCCACATCGCTGTGTAAATAATAGGTTGTGTTAGCATGTCATGAAGATAGAGATGGCGTGTTGAGGGCAGAAAATTCGGGGAGGTTGTTTTAGATGTGAGGGTGAGAAAAAAAGAAGAGTGGATGTGTTCGACCTTTGCCATGACAGGTGCGCTTGCATGGCAGGTCACAGAAACCAAATAAAAGCACTTCTTTTTTGGTGTTTGAAGGGGGAGATGGCACGGGGCTTTTGTCTCTTTTGCCCGGCTCTCCCCCTTCCTGCGTCTCGTGTCCCGGTTTCCTCTTTTTCCTTATTCTCGTTTCGCTCGTTGTGCACATCCCTATCGTCCGCCTGTGCATAGTGATCCTATGCAAATTGCACCGAGTGCGGAAACATCAGTAGAATGCAGGGAAACGAAAGCCGTGATGCTAGTTAAACTAGTAATTCTCGTTGGTTGAAGTGGCCTTGGTGCACCTTCACGTTCAATGGCACGATGATAGCCACCTCGATGCAAGGAAAGTCCCGGATTATAATCAAATTCCACCATAAGGTACATCTTAAATTTTGCGCCTTTCATTGTGCTCATACTGCCTATGGCGGCACTATGCGAAGTTTAATGGCGTGCAAATTATCTGCTTGACTGATGACTTGATGGATTCCAAAAGAACTTCACTCTCACTTGCGGCCGTTTTATCCTTTGTAAGCCTGATTAATGATGGTAATATGGGTTCTCAAATAATTGATGACAGATCAAGATTTCATGAGCTCGTTATTCTTTTGAAATTTCTTGAAAATTGCTTCAGCTCCGTTTGCATTTGTGGTGACCCTGGTAAACATCACACGATATCCTTACTAATGCTCAAGAAGATACACTAACAACGATTCTTGCACCTTAAAGTGGACGCTTCCCAAGAAATTGGAAGTTTGTCTTAATCAGATACATAGGTTATATATGGAAATTGACTACTTATACATTGAAGCAGTTCCTACGCATTGTTTGCTTGTGGATGAGAGTTCTCTTTTATTTTTATTTTTTATTTTGGCACTATCCTGCGTTGCCTTTTATTGTTCTTGTTCGGAAATGATAGTACATAAAGACGATTCCTGATATGGAATGTCAAAGCATTCTGAAGATGGTGTAAGGTGAAAGATAGTGTATTTGAGATGTATGTTGTAGAGATTTGTGTTGTTTGAGCGAGGTTTGCTGCTCTGCTGAGCGGTATCAGATTTTTCAAGTCATTGGATCAAATGAAATAGCCGATGCCAGATCAACCTGATTGTGCGGACTGAAGCGGTGTGGAGCGCTGGGATGCCAAATCAACTAGGATGGCTTAAATTTGTCTGATGGGTTTGATTCTTTTGACTGGTTTACAGAGCTGTGGAAGTCATTGATGTTTCACGTACGCTGAGCCTCTGACCTATCCATGAAGAGACTCAATTGAAGTTGATCGCTCCATGGCTTTATTGGAAGAATTCCTCCAGCTGCGTGGATGGTCCTTCATAGCTGTCTCACGAAAACCAAGACGGTGATAATCTGCCTAAATTGTCCATTCTCTTTGGCTGCATGAGTAGTGCCAGTTCATATATTTGAGTTCAATAATTGAACTAAGTGAAGCACCTGCACGACGGAGCGTGCGAGTGATGCATTCTCCACTTGTGGTAGCATCTGTTTTTGACGCCTGATAATCTTCCTTGCTTCAGTTGCGTTAAAGCTGAATTCGAGGACCAAAATATAAAAATCGAAGTAGTCCAGATCTTGGGGAATTTCCCGCAGGATTAGTAATGGAGTATGAATTGCGGGTCAGTGTCCCCCTGAATGTCTACTGTGTGCGCTTTGCTGAAGTTGGCATTGTATGTCCTTTTATGACAAGATGCTTAGTCGTAATC no hit
LYPTUS00S00000017 CL1Contig155 GCGTCCGCTGTTTAGCACCCACTTTGCTTCGTTTGATCTTCTCGTGATTTATTATTTACCTATGTACAGCTGCGGTTGAAATGGCCTCTCTCGCTTAAATGGTAGTTTGTCCTTTTCTTGGAGTGGTTGCTTTGGAAATATTCTTTTAGAAGCAGGGGCAAAGAAATGGAGTGGCATCTGATGCTTCTTCAACACTTTGCAGCCATATTGAGGATATATACCTAGAGAGAGAGAGAGAGAGAGAGAGAAGCAGTGGAGAAGAAGAAAAGGGTCAGATCAGATCCAGTTGTTGGGAGCAAGTATGGCTTCAAAGCTGATCTTGATCGCGGTCTTCGTCTTTGATGTCATTGCCTTTGGACTTGCCGTTGCGGCTGAGCAGAGAAGAAGCACTGCCACAGTTGTCACGGACAATGAAAAAGACTACAATTACTGCCGGTATGACTCAGACATCTCCACCGGCTATGGCGTCGGAGCATTTCTGTTCCTAATGGTTAGCCAAGGCATCATAATGGCAGCAAGCCGCTGCTTCTGCTGCGGAAAGCCCTTGAGTCCCGGAGGCTCGCGCGCCTCGGCAGTCATTCTTTTCATTACCTGCTGGGTGTTCTTCATCATCGCGGAGGTGTGCTTGTTGGCGGGATCGGTAACGAATGCGTACCACACCAAGTACAGGACCCCCTTTGGCGGGAACCCTCTCTCGTGCGAAACAGTGAGGAAGGGGGTGTTCGGCTCCGGAGCATCATTCCTCTTCTTCACTGCCATCGTGTCTGAGCTCTACTACACTTGCTACTCCAGGGCCAGGGAAAGCTTCCGACCTTATGACAGATAAACATGTGTGGGCTTGCGCGCCTACAAAAGAGAACTCTCCTTTGCTTTGGGTTTATCAT no hit
LYPTUS00S00000018 CL1Contig152 CACGCGTCCGCTGCTCTGCTCTGCTCTGCTCTCTGTCCCTGTGTGCGCACGTTAGCCCCGCCGCCGCCGGAGAAGTGCGCACATTAGCCCGGCAGGGACGAGACAGAGCGGCCCCCCCGCTTCTTTCCGCAAAGCCGCCGCCGCCATGGATCAGCTCCGCCGCCCGCTGCTGCTGCTCGGGCTCATCTGCATTGCCCTCGCCGGCGCCTCCGCCCAGGGCCCCTCCACCGCCCCCACCACCACGCCCGCCCCTCCCACGCCTACCACCCCCGCCGCCGCCCCGCCCCCCACCACCACCACCCCGCCGCCCACGAGCTCCCCCCCTCCCGCCGCCCTCTCCCCTCGCGTCCCCGCCGGCCCTCGTCCCAGCACCGGCCCCGGCGACGAAGCCGACGTCCCCGTCGCCGTCGCCCTCGTTGCTGAGCCCTCCGGCGCCGCCGACGGTGGCTCCGCGCCGAGCCCTGAGCTCGGGGCTCCAGCCCGTT no hit
LYPTUS00S00000019 CL1Contig182 CTTTTTATCCTCTAAATGGCTAACAGATTCCAAATGTTGCTTTAGTATAGCGGCGGCTTGTACCCCGCTCGCTATGTTGGATTACAACGTCGCGACTGGGCAAAACAAGCCAGCAGCCTCCCCAACAGCCCCAATGGTCTTGCCGCCGCCACCCGTGTCCCTGGCACCCGTGTCCCCGGCGCCGGATTCCCCTCCCCCGCCAGCCCCACCCCAAGCCCACCTCTTGAAGATCCTCCAGAAGGAGGGTGGCTTCACCGTCCTGATCAAGCTCCTCCGCGGCACCCACGTGTCCGACCAGGTGGACTCGGAGCTCTCCGACCTCAACGAAGGCATCACCTTCTTCGCGCCAGACGATGCCGCCTTCTCAGCCCTCAAGGCCGGGACCCTCAACACCCTCTCGAACGAGCAGCAGGTCCAACTCCTGCAGTTCCACATGGTGCCCACCTATTTGACCATGTCCCAGTTCCAGACGGTGAGCAACCCTCTCATGACCAGGGCCGGCGGCGTGGGCGGCAAGGAGTTCCCGCTCAATGTCACCACGAAGGGCGACAAAGTCAGCGTCTTCACCGGGGTCGACGGAGCCTCGGTGACGAAGACACTGTTCACGGACGGCAAGCTCGCGGTGTACCAGGTGGACAAGGTGCTCCTCCCCGTCAGCATCTTCTCGAAGGGAGAAGACTACGCGCAGGGGCCGGCTCCACCGACGAAGAAGCCAGCCGAGCTGAGTGTCTCGGGCTCGAGCGAAGTCGGGAAGGTGAAGACTGGGGACGTCGTTCGCCTCGTCGTGGGCATCGGGGTCGCCGGAGTCGTCGCTTCTCTCGGTTTGTGATCTGAAAATGGCGATTCCGGGTTTTTTCACTTAATCGGTTTGTAGCTCCTTTTGGTTTCCCAGTGCACAACGTGTTGATATGGGGTCAAGAGACGATCTCTCTCTTGAAACTGGATTTCTTTCTTTCTTTCTTTCTTTTGTTTAAATGTCTCTCCTTTTGTTTCTTCCTTTTGGGTATTTGTGACAATCGTTTTGCGATTCGAATGTAATAAATATCTTCTCTTTTAATCTGTTTCGAGTTTCCATATGGTATAATTGTGGATATTTGGAGTCA acc=Q9SJ81 [Fasciclin-like arabinogalactan protein 7 precursor] [evalue=1e-16]
LYPTUS00S00000020 CL1Contig159 GCGTCCGCTAGGATGTCGCCTCTCTTTCTCGATCGATTCCCAGCCAAAGCCCTAGCGAATTCTCTCAAGATGCAGATCTCCGTCGAGACTCTCACCGGGAAGCTCCGACACCATCAACAACGTCAAGGCCATGATCCAGGACAAGGAAGGCATCCCGCCGGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGTTCCAGGACAGCAGCACCCTTGCCGATTACAACATCCAGAAGGAGTCCACCCTCCACCTAGTGCTCAGGCTCCGGGGAGGCATGCAGATCTTCCTTAAGCCTCACCGGCGAGACCATTACCCTCGAGGTCGAGAGCTCCGACACCATCGACAGCGTGAAGGCCTAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAACTTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACGCTAGCCGACTACAACATCCAGAAGGAGTCGACCCTCCACCTCGTCCTCCGTCTCTCTGCGGAGGCATGCAGATCTTCGTCGAGACCATGACCGGCAAGACGATTACCCTCGAGGTGGAGAGCTCCGACAGCATTGACAACGTCAAGGCCGAGATCCAGGACAAGGAAAGGATCCCACCAGACTAGTAGCATCTGATCTTCGCTGGAAAGCAGCTCGAGGACGGTCGCACCCTTGCCGACTACAACATCCAAAAGGAGTCGACCCTTCACATCGTGCTGAGGCTCAGG acc=P59263 [Ubiquitin sp|P03993|UBIQ_SOYBN Ubiquitin] [evalue=2e-29]

Total number of rows: 21413

Table truncated, full table size 14846 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL14357_2006-02-21_Eucalyptus_50mer.ndf.gz 20.4 Mb (ftp)(http) NDF
GPL14357_2006-02-21_Eucalyptus_50mer.ngd.gz 481.7 Kb (ftp)(http) NGD

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap