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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Jun 09, 2011 |
| Title |
Candida albicans 181K tiling ChIP array (assembly Ca20) |
| Technology type |
in situ oligonucleotide |
| Distribution |
custom-commercial |
| Organism |
Candida albicans |
| Manufacturer |
Agilent |
| Manufacture protocol |
see manufacturer's website
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| Submission date |
Jun 07, 2011 |
| Last update date |
Nov 05, 2013 |
| Contact name |
Clarissa Jane Nobile |
| E-mail(s) |
cnobile@ucmerced.edu
|
| Organization name |
University of California - Merced
|
| Department |
Molecular and Cell Biology
|
| Lab |
Clarissa Nobile
|
| Street address |
5200 North Lake Rd
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| City |
Merced |
| State/province |
CA |
| ZIP/Postal code |
95343 |
| Country |
USA |
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| Samples (22)
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GSM738221, GSM738222, GSM738223, GSM738224, GSM758884, GSM758885
GSM758886, GSM758887, GSM758888, GSM758889, GSM758890, GSM758891, GSM758892, GSM758893, GSM1011804, GSM1011805, GSM1011806, GSM1011807, GSM1011808, GSM1011809, GSM1011810, GSM1011811
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| Series (4)
|
| GSE29785 |
Biofilm matrix regulation by Candida albicans Zap1 |
| GSE30591 |
A unique iron homeostasis regulatory circuit with reciprocal roles in Candida albicans commensalism and pathogenesis [ChIP_chip] |
| GSE30593 |
A unique iron homeostasis regulatory circuit with reciprocal roles in Candida albicans commensalism and pathogenesis |
| GSE41237 |
Chip-chip from Candida albicans cells with HMS1-MYC, RTG1-MYC, RTG3-MYC, GFP-ZCF21, GFP-LYS14, GFP-LYS144 |
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| Relations |
| Alternative to |
GPL17891 |
| Alternative to |
GPL17892 |
| Data table header descriptions |
| ID |
|
| Genome_Position |
Position of probe in the Genome |
| Probe ID |
Probe ID |
| SEQUENCE |
Probe Sequence |
| SPOT_ID |
|
| Data table |
| ID |
Genome_Position |
Probe ID |
SEQUENCE |
SPOT_ID |
| 1 |
chr1:1000008-1000067 |
Ca20chr112713_1000008 |
TTCATTTCAACAATTGAATTGTTAACAAGCAAGTATGGAGCATCAGATAAATATGCACCG |
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| 2 |
chr1:1000008-1000067 |
Ca20chr112713_1000008 |
TTCATTTCAACAATTGAATTGTTAACAAGCAAGTATGGAGCATCAGATAAATATGCACCG |
|
| 3 |
chr1:1000054-1000113 |
Ca20chr112714_1000054 |
ATAAATATGCACCGAATGAAGTTGCAGGTGCTTTATTGAAAGACCAGCCAAAGTATTGAG |
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| 4 |
chr1:1000054-1000113 |
Ca20chr112714_1000054 |
ATAAATATGCACCGAATGAAGTTGCAGGTGCTTTATTGAAAGACCAGCCAAAGTATTGAG |
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| 5 |
chr1:1000132-1000191 |
Ca20chr112715_1000132 |
CTTTGGAGAATTTGGCATTTTCATCATAATGGGAATCAGGATAGAAGGAGATATCATTAC |
|
| 6 |
chr1:1000132-1000191 |
Ca20chr112715_1000132 |
CTTTGGAGAATTTGGCATTTTCATCATAATGGGAATCAGGATAGAAGGAGATATCATTAC |
|
| 7 |
chr1:1000204-1000263 |
Ca20chr112716_1000204 |
TATTGAATGATTTGTAATAGTCTGTGAAATTGTATGTCTTTCCTGGAGCATCTTTGGAGT |
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| 8 |
chr1:1000204-1000263 |
Ca20chr112716_1000204 |
TATTGAATGATTTGTAATAGTCTGTGAAATTGTATGTCTTTCCTGGAGCATCTTTGGAGT |
|
| 9 |
chr1:1000282-1000341 |
Ca20chr112717_1000282 |
ATGGAACCAGGGTACAGTTACCTTCAGCACCTAGTTTATAATCTAATTGAATATGGAAAT |
|
| 10 |
chr1:1000337-1000396 |
Ca20chr112718_1000337 |
GAAATCACTGGCATGTAAAACATTAAATGTTTCTGAATTATTGGTGTAAACTGGAGGCTT |
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| 11 |
chr1:1000337-1000396 |
Ca20chr112718_1000337 |
GAAATCACTGGCATGTAAAACATTAAATGTTTCTGAATTATTGGTGTAAACTGGAGGCTT |
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| 12 |
chr1:1000399-1000458 |
Ca20chr112719_1000399 |
TATATTTGCTATCTTTTTTAGGCCACCAACTTTCAAGGTCAAATAATTCCGTGACATTTG |
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| 13 |
chr1:1000399-1000458 |
Ca20chr112719_1000399 |
TATATTTGCTATCTTTTTTAGGCCACCAACTTTCAAGGTCAAATAATTCCGTGACATTTG |
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| 14 |
chr1:1000476-1000535 |
Ca20chr112720_1000476 |
CAAGCTTTGTTCCCCTTGAAATAACAATAAGTTTCTAAATCATATTCACTCGAAGTGTTG |
|
| 15 |
chr1:1000476-1000535 |
Ca20chr112720_1000476 |
CAAGCTTTGTTCCCCTTGAAATAACAATAAGTTTCTAAATCATATTCACTCGAAGTGTTG |
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| 16 |
chr1:1000520-1000579 |
Ca20chr112721_1000520 |
TTCACTCGAAGTGTTGAATCTTTTGATTATTTGAAGGAAATCATTATCATAGAAATTGAC |
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| 17 |
chr1:100056-100115 |
Ca20chr11271_100056 |
ATATACTTGAAAACTGAAAATGTGAATGTTGCCAATAAGCTAAAACTCCCAGAAACCGAA |
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| 18 |
chr1:1000580-1000639 |
Ca20chr112722_1000580 |
ATTACTAATAGAGGAAATACCGGCATCAGGACCATCATCATTAAATCTTTGTTCATTTCT |
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| 19 |
chr1:1000651-1000710 |
Ca20chr112723_1000651 |
TGACAAAGAAATCAGTCCATTGACAAGCTTCTCTCCATTGAGTGTTCAAACAATTTTTAA |
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| 20 |
chr1:1000724-1000783 |
Ca20chr112724_1000724 |
AACCAAATGTTCTTTGTCAGGGTTTTGTTCTACCAAATTTTTGGCATTGATGATTCTACT |
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Total number of rows: 243504
Table truncated, full table size 25850 Kbytes.
| Supplementary data files not provided |
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