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Status
Public on Jul 19, 2011
Title
[SYNG010s520477] Affymetrix Helianthus annuus 94K
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Helianthus annuus Manufacturer
Affymetrix
Manufacture protocol
see manufacturer's web site
Submission date
Jun 18, 2010
Last update date
Jul 22, 2010
Contact name
sandrine balzergue
Organization name
INRA
Lab
IRHS
Street address
Rue G. Morel
City
Beaucouze
ZIP/Postal code
49000
Country
France
Samples (498)
GSM559117 , GSM559118 , GSM559119 , GSM559120 , GSM559121 , GSM559122
GSM568681 ,
GSM568682 ,
GSM568683 ,
GSM568684 ,
GSM568685 ,
GSM568686 ,
GSM568695 ,
GSM568696 ,
GSM568697 ,
GSM568698 ,
GSM631564 ,
GSM631565 ,
GSM631566 ,
GSM631567 ,
GSM631568 ,
GSM631569 ,
GSM631570 ,
GSM631571 ,
GSM631572 ,
GSM631573 ,
GSM631574 ,
GSM631575 ,
GSM631576 ,
GSM631577 ,
GSM631578 ,
GSM631579 ,
GSM631580 ,
GSM631581 ,
GSM631582 ,
GSM631583 ,
GSM631584 ,
GSM631585 ,
GSM631586 ,
GSM631587 ,
GSM631588 ,
GSM631589 ,
GSM631590 ,
GSM631591 ,
GSM631592 ,
GSM631593 ,
GSM631594 ,
GSM631595 ,
GSM631596 ,
GSM631597 ,
GSM631598 ,
GSM631599 ,
GSM631600 ,
GSM631601 ,
GSM631602 ,
GSM631603 ,
GSM631604 ,
GSM631605 ,
GSM631606 ,
GSM631607 ,
GSM631608 ,
GSM631609 ,
GSM631610 ,
GSM631611 ,
GSM631612 ,
GSM631613 ,
GSM631614 ,
GSM631615 ,
GSM631616 ,
GSM631617 ,
GSM631618 ,
GSM631619 ,
GSM631620 ,
GSM631621 ,
GSM631622 ,
GSM631623 ,
GSM631624 ,
GSM631625 ,
GSM631626 ,
GSM631627 ,
GSM631628 ,
GSM631629 ,
GSM631630 ,
GSM631631 ,
GSM631632 ,
GSM631633 ,
GSM631634 ,
GSM631635 ,
GSM631636 ,
GSM631637 ,
GSM631638 ,
GSM631639 ,
GSM631640 ,
GSM631641 ,
GSM631642 ,
GSM631643 ,
GSM631644 ,
GSM631645 ,
GSM631646 ,
GSM631647 ,
GSM631648 ,
GSM631649 ,
GSM631650 ,
GSM631651 ,
GSM631652 ,
GSM631653 ,
GSM631654 ,
GSM631655 ,
GSM631656 ,
GSM631657 ,
GSM631658 ,
GSM631659 ,
GSM631660 ,
GSM631661 ,
GSM631662 ,
GSM631663 ,
GSM631664 ,
GSM631665 ,
GSM631666 ,
GSM631667 ,
GSM631668 ,
GSM631669 ,
GSM631670 ,
GSM631671 ,
GSM631672 ,
GSM631673 ,
GSM631674 ,
GSM631675 ,
GSM631676 ,
GSM631677 ,
GSM631678 ,
GSM631679 ,
GSM631680 ,
GSM631681 ,
GSM631682 ,
GSM631683 ,
GSM631684 ,
GSM631685 ,
GSM631686 ,
GSM631687 ,
GSM631688 ,
GSM631689 ,
GSM631690 ,
GSM631691 ,
GSM631692 ,
GSM631693 ,
GSM631694 ,
GSM631695 ,
GSM631696 ,
GSM631697 ,
GSM631698 ,
GSM631699 ,
GSM631700 ,
GSM631701 ,
GSM631702 ,
GSM631703 ,
GSM631704 ,
GSM631705 ,
GSM631706 ,
GSM631707 ,
GSM631708 ,
GSM631709 ,
GSM631710 ,
GSM631711 ,
GSM631712 ,
GSM631713 ,
GSM631714 ,
GSM631715 ,
GSM631716 ,
GSM631717 ,
GSM631718 ,
GSM631719 ,
GSM635477 ,
GSM635478 ,
GSM635479 ,
GSM635480 ,
GSM635481 ,
GSM635482 ,
GSM635483 ,
GSM635484 ,
GSM635485 ,
GSM635486 ,
GSM635487 ,
GSM635488 ,
GSM635489 ,
GSM635490 ,
GSM635491 ,
GSM635492 ,
GSM635493 ,
GSM635494 ,
GSM635495 ,
GSM635496 ,
GSM635497 ,
GSM635498 ,
GSM635499 ,
GSM635500 ,
GSM886703 ,
GSM886704 ,
GSM886705 ,
GSM886706 ,
GSM886707 ,
GSM886708 ,
GSM886709 ,
GSM886710 ,
GSM886711 ,
GSM886712 ,
GSM886713 ,
GSM886714 ,
GSM886715 ,
GSM886716 ,
GSM886717 ,
GSM886718 ,
GSM886719 ,
GSM886720 ,
GSM886721 ,
GSM886722 ,
GSM886723 ,
GSM886724 ,
GSM886725 ,
GSM886726 ,
GSM949939 ,
GSM949940 ,
GSM949941 ,
GSM949942 ,
GSM949943 ,
GSM949944 ,
GSM949945 ,
GSM949946 ,
GSM949947 ,
GSM949948 ,
GSM949949 ,
GSM949950 ,
GSM949951 ,
GSM949952 ,
GSM949953 ,
GSM949954 ,
GSM949955 ,
GSM949956 ,
GSM949957 ,
GSM949958 ,
GSM949959 ,
GSM949960 ,
GSM949961 ,
GSM949962 ,
GSM949963 ,
GSM949964 ,
GSM949965 ,
GSM949966 ,
GSM949967 ,
GSM949968 ,
GSM949969 ,
GSM949970 ,
GSM949971 ,
GSM949972 ,
GSM949973 ,
GSM949974 ,
GSM949975 ,
GSM949976 ,
GSM949977 ,
GSM949978 ,
GSM949979 ,
GSM949980 ,
GSM949981 ,
GSM949982 ,
GSM949983 ,
GSM949984 ,
GSM949985 ,
GSM949986 ,
GSM949987 ,
GSM949988 ,
GSM949989 ,
GSM949990 ,
GSM949991 ,
GSM949992 ,
GSM949993 ,
GSM949994 ,
GSM949995 ,
GSM949996 ,
GSM949997 ,
GSM949998 ,
GSM949999 ,
GSM950000 ,
GSM950001 ,
GSM950002 ,
GSM950003 ,
GSM950004 ,
GSM950005 ,
GSM950006 ,
GSM950007 ,
GSM950008 ,
GSM950009 ,
GSM950010 ,
GSM950011 ,
GSM950012 ,
GSM950013 ,
GSM950014 ,
GSM950015 ,
GSM950016 ,
GSM950017 ,
GSM950018 ,
GSM950019 ,
GSM950020 ,
GSM950021 ,
GSM950022 ,
GSM950023 ,
GSM950024 ,
GSM950025 ,
GSM950026 ,
GSM950027 ,
GSM950028 ,
GSM950029 ,
GSM950030 ,
GSM950031 ,
GSM950032 ,
GSM950033 ,
GSM950034 ,
GSM950035 ,
GSM950036 ,
GSM950037 ,
GSM950038 ,
GSM950039 ,
GSM950040 ,
GSM950041 ,
GSM950042 ,
GSM950043 ,
GSM950044 ,
GSM950045 ,
GSM950046 ,
GSM950047 ,
GSM950048 ,
GSM950049 ,
GSM950050 ,
GSM950051 ,
GSM950052 ,
GSM950053 ,
GSM950054 ,
GSM950055 ,
GSM950056 ,
GSM950057 ,
GSM950058 ,
GSM950059 ,
GSM950060 ,
GSM950061 ,
GSM950062 ,
GSM950063 ,
GSM950064 ,
GSM950065 ,
GSM950066 ,
GSM950067 ,
GSM950068 ,
GSM950069 ,
GSM950070 ,
GSM950071 ,
GSM950072 ,
GSM950073 ,
GSM950074 ,
GSM950075 ,
GSM950076 ,
GSM950077 ,
GSM950078 ,
GSM950079 ,
GSM950080 ,
GSM950081 ,
GSM950082 ,
GSM950083 ,
GSM950084 ,
GSM950085 ,
GSM950086 ,
GSM950087 ,
GSM950088 ,
GSM950089 ,
GSM950090 ,
GSM950091 ,
GSM950092 ,
GSM950093 ,
GSM950094 ,
GSM950095 ,
GSM950096 ,
GSM950097 ,
GSM950098 ,
GSM950099 ,
GSM950100 ,
GSM950101 ,
GSM950102 ,
GSM950103 ,
GSM950104 ,
GSM950105 ,
GSM950106 ,
GSM950107 ,
GSM950108 ,
GSM950109 ,
GSM950110 ,
GSM950111 ,
GSM950112 ,
GSM950113 ,
GSM950114 ,
GSM950115 ,
GSM950116 ,
GSM950117 ,
GSM950118 ,
GSM950119 ,
GSM950120 ,
GSM950121 ,
GSM950122 ,
GSM950123 ,
GSM950124 ,
GSM950125 ,
GSM950126 ,
GSM950127 ,
GSM950128 ,
GSM950129 ,
GSM950130 ,
GSM950131 ,
GSM950132 ,
GSM950133 ,
GSM950134 ,
GSM950135 ,
GSM950136 ,
GSM950137 ,
GSM950138 ,
GSM950139 ,
GSM950140 ,
GSM950141 ,
GSM950142 ,
GSM950143 ,
GSM950144 ,
GSM950145 ,
GSM950146 ,
GSM950147 ,
GSM950148 ,
GSM950149 ,
GSM950150 ,
GSM950151 ,
GSM950152 ,
GSM950153 ,
GSM950154 ,
GSM950155 ,
GSM950156 ,
GSM950157 ,
GSM950158 ,
GSM950159 ,
GSM950160 ,
GSM950161 ,
GSM950162 ,
GSM950163 ,
GSM950164 ,
GSM950165 ,
GSM950166 ,
GSM950167 ,
GSM950168 ,
GSM950169 ,
GSM950170 ,
GSM950171 ,
GSM950172 ,
GSM950173 ,
GSM950174 ,
GSM1027948 ,
GSM1027949 ,
GSM1027950 ,
GSM1027951 ,
GSM1027952 ,
GSM1027953 ,
GSM1027954 ,
GSM1027955 ,
GSM1027956 ,
GSM1027957 ,
GSM1027958 ,
GSM1027959 ,
GSM1027960 ,
GSM1027961 ,
GSM1027962 ,
GSM1027963 ,
GSM1027964 ,
GSM1027965 ,
GSM1079865 ,
GSM1079866 ,
GSM1079867 ,
GSM1079868 ,
GSM1079869 ,
GSM1079870 ,
GSM1079871 ,
GSM1079872 ,
GSM1079873 ,
GSM1079874 ,
GSM1079875 ,
GSM1079876 ,
GSM1110142 ,
GSM1110143 ,
GSM1110144 ,
GSM1110145 ,
GSM1110146 ,
GSM1110147 ,
GSM1110148 ,
GSM1110149 ,
GSM1110150 ,
GSM1110151 ,
GSM1110152 ,
GSM1110153 Series (11)
GSE22519 Identification of ABA regulated genes in sunflower
GSE23046 affy_dormance_totalrna_sunflower-Molecular mechanisms of seed dormancy release: transcriptome evolution and ROS signalling during sunflower seed after-ripening.
GSE23048 affy_dormance_mrnaoxidized_sunflower-Molecular mechanisms of seed dormancy release: transcriptome evolution and ROS signalling during sunflower seed after-ripening.
GSE25717 affy_mildew_sunflower-PAM2010
GSE25719 affy_sunyfuel_drought_sunflower-Sunyfuel
GSE25888 affy_strigolactone_sunflower-Identification of Strigolactone -regulated genes in sunflower
GSE36304 affy_tour_2010_21-Assessing drought stress transcriptomics in Helianthus annus in field cultures
GSE38812 eqtl-Identification of expression QTL of ABA response in sunflower
GSE41944 affy_tour_2012-02-Study of sunflower seed dormancy by translatome analysis
GSE44165 affy_sunflower_2010_13-ROS and hormones in sunflower seed dormancy.
GSE45586 affy_sunflower_2011_02-Effect of frost on sunflower
Data table header descriptions ID GB_ACC GenBank accession
SPOT_ID
Data table ID GB_ACC SPOT_ID AFFX-BioB-5_st
J04423.1 E. coli /GEN=bioB /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 2032-2305 of gb:J04423.1 /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.
AFFX-BioB-M_st
J04423.1 E. coli /GEN=bioB /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 2482-2739 of gb:J04423.1 /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.
AFFX-BioB-3_st
J04423.1 E. coli /GEN=bioB /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 2755-3052 of gb:J04423.1 /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.
AFFX-BioC-5_st
J04423.1 E. coli /GEN=bioC /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 4218-4566 of gb:J04423.1 /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.
AFFX-BioC-3_st
J04423.1 E. coli /GEN=bioC /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 4626-4878 of gb:J04423.1 /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.
AFFX-BioDn-5_st
J04423.1 E. coli /GEN=bioD /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 4980-5256 of gb:J04423.1, not 100% identical /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.
AFFX-BioDn-3_st
J04423.1 E. coli /GEN=bioD /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 5286-5570 of gb:J04423.1, not 100% identical /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.
AFFX-CreX-5_st
X03453.1 Bacteriophage P1 /GEN=cre /DB_XREF=gb:X03453.1 /NOTE=SIF corresponding to nucleotides 513-1047 of gb:X03453.1 /DEF=Bacteriophage P1 cre gene for recombinase protein.
AFFX-CreX-3_st
X03453.1 Bacteriophage P1 /GEN=cre /DB_XREF=gb:X03453.1 /NOTE=SIF corresponding to nucleotides 1089-1495 of gb:X03453.1 /DEF=Bacteriophage P1 cre gene for recombinase protein.
AFFX-DapX-5_at
L38424.1 B. subtilis /GEN=dapB /DB_XREF=gb:L38424.1 /NOTE=SIF corresponding to nucleotides 1428-1926 of gb:L38424.1 /DEF=Bacillus subtilis dihydropicolinate reductase (jojE) gene, complete cds; poly(A) polymerase (jojI) gene, complete cds; biotin acetyl-CoA-carboxylase ligase (birA) gene, complete cds; jojC, jojD, jojF, jojG, jojH genes, complete cds's.
AFFX-DapX-M_at
L38424.1 B. subtilis /GEN=dapB, jojF /DB_XREF=gb:L38424.1 /NOTE=SIF corresponding to nucleotides 2020-2580 of gb:L38424.1 /DEF=Bacillus subtilis dihydropicolinate reductase (jojE) gene, complete cds; poly(A) polymerase (jojI) gene, complete cds; biotin acetyl-CoA-carboxylase ligase (birA) gene, complete cds; jojC, jojD, jojF, jojG, jojH genes, complete cds's.
AFFX-DapX-3_at
L38424.1 B. subtilis /GEN=jojG /DB_XREF=gb:L38424.1 /NOTE=SIF corresponding to nucleotides 2684-3130 of gb:L38424.1 /DEF=Bacillus subtilis dihydropicolinate reductase (jojE) gene, complete cds; poly(A) polymerase (jojI) gene, complete cds; biotin acetyl-CoA-carboxylase ligase (birA) gene, complete cds; jojC, jojD, jojF, jojG, jojH genes, complete cds's.
AFFX-LysX-5_at
X17013.1 B. subtilis /GEN=lys /DB_XREF=gb:X17013.1 /NOTE=SIF corresponding to nucleotides 387-658 of gb:X17013.1, not 100% identical /DEF=B subtilis lys gene for diaminopimelate decarboxylase (EC 4.1.1.20).
AFFX-LysX-M_at
X17013.1 B. subtilis /GEN=lys /DB_XREF=gb:X17013.1 /NOTE=SIF corresponding to nucleotides 720-990 of gb:X17013.1, not 100% identical /DEF=B subtilis lys gene for diaminopimelate decarboxylase (EC 4.1.1.20).
AFFX-LysX-3_at
X17013.1 B. subtilis /GEN=lys /DB_XREF=gb:X17013.1 /NOTE=SIF corresponding to nucleotides 1061-1343 of gb:X17013.1, not 100% identical /DEF=B subtilis lys gene for diaminopimelate decarboxylase (EC 4.1.1.20).
AFFX-PheX-5_at
M24537.1 B. subtilis /GEN=pheA /DB_XREF=gb:M24537.1 /NOTE=SIF corresponding to nucleotides 2028-2375 of gb:M24537.1, not 100% identical /DEF=Bacillus subtillis sporulation protein (spoOB), GTP-binding protein (obg), phenylalanine biosynthesis associated protein (pheB), and monofunctional prephenate dehydratase (pheA) genes, complete cds.
AFFX-PheX-M_at
M24537.1 B. subtilis /GEN=pheA /DB_XREF=gb:M24537.1 /NOTE=SIF corresponding to nucleotides 2437-2828 of gb:M24537.1 /DEF=Bacillus subtillis sporulation protein (spoOB), GTP-binding protein (obg), phenylalanine biosynthesis associated protein (pheB), and monofunctional prephenate dehydratase (pheA) genes, complete cds.
AFFX-PheX-3_at
M24537.1 B. subtilis /GEN=pheB /DB_XREF=gb:M24537.1 /NOTE=SIF corresponding to nucleotides 2885-3326 of gb:M24537.1, not 100% identical /DEF=Bacillus subtillis sporulation protein (spoOB), GTP-binding protein (obg), phenylalanine biosynthesis associated protein (pheB), and monofunctional prephenate dehydratase (pheA) genes, complete cds.
AFFX-ThrX-5_at
X04603.1 B. subtilis /GEN=thrC /DB_XREF=gb:X04603.1 /NOTE=SIF corresponding to nucleotides 288-932 of gb:X04603.1 /DEF=B. subtilis thrB and thrC genes for homoserine kinase and threonine synthase (EC 2.7.1.39 and EC 4.2.99.2, respectively).
AFFX-ThrX-M_at
X04603.1 B. subtilis /GEN=thrC, thrB /DB_XREF=gb:X04603.1 /NOTE=SIF corresponding to nucleotides 995-1562 of gb:X04603.1, not 100% identical /DEF=B. subtilis thrB and thrC genes for homoserine kinase and threonine synthase (EC 2.7.1.39 and EC 4.2.99.2, respectively).
94691 7237 Kbytes .Supplementary file Size Download File type/resource GPL10568_SYNG010s520477.cdf.gz
14.0 Mb
(ftp) (http) CDF
GPL10568_SYNG010s520477.psi.gz
519.4 Kb
(ftp) (http) PSI
GPL10568_SYNG010s520477_PROBES_SUNFLOWER_fas.txt.gz
40.1 Mb
(ftp) (http) TXT
GPL10568_SYNG010s520477_psrLevel.gin.gz
4.8 Mb
(ftp) (http) GIN
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