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Status
Public on May 05, 2010
Title
Rosetta/Merck Human RSTA Custom Affymetrix 2.0 microarray [HuRSTA-2a520709]
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Homo sapiens Manufacturer
Affymetrix
Manufacture protocol
See manufacturer website.
Description
Contains probesets for each transcript. Probeset is made of 4 to 20 distinct probes.
Web link
http://www.rii.com Contributor(s)
Kulkarni A , Castle J Submission date
May 03, 2010
Last update date
Jul 09, 2014
Contact name
Amit V Kulkarni
E-mail(s)
amit_kulkarni@merck.com Phone
206-802-7352
Organization name
Rosetta Inpharmatics / Merck Pharmaceuticals
Department
Genomics
Lab
Array Design
Street address
401 Terry Ave N
City
Seattle
State/province
WA
ZIP/Postal code
98109
Country
USA
Samples (2879)
GSM552132 , GSM552133 , GSM552134 , GSM552135 , GSM552136 , GSM552137
GSM552138 ,
GSM552139 ,
GSM552140 ,
GSM552141 ,
GSM552142 ,
GSM552143 ,
GSM552144 ,
GSM552145 ,
GSM552146 ,
GSM552147 ,
GSM552148 ,
GSM552149 ,
GSM552150 ,
GSM552151 ,
GSM552152 ,
GSM556544 ,
GSM556545 ,
GSM556546 ,
GSM556547 ,
GSM556548 ,
GSM556549 ,
GSM556550 ,
GSM556551 ,
GSM556552 ,
GSM556553 ,
GSM556554 ,
GSM556555 ,
GSM556556 ,
GSM556557 ,
GSM556558 ,
GSM556559 ,
GSM556560 ,
GSM556561 ,
GSM556562 ,
GSM556563 ,
GSM556564 ,
GSM556565 ,
GSM556566 ,
GSM556567 ,
GSM556568 ,
GSM556569 ,
GSM556570 ,
GSM556571 ,
GSM556572 ,
GSM556573 ,
GSM556574 ,
GSM556575 ,
GSM556576 ,
GSM556577 ,
GSM556578 ,
GSM576135 ,
GSM576136 ,
GSM576137 ,
GSM576138 ,
GSM576139 ,
GSM576140 ,
GSM576141 ,
GSM576142 ,
GSM576143 ,
GSM576144 ,
GSM576145 ,
GSM576146 ,
GSM576147 ,
GSM576148 ,
GSM576149 ,
GSM576150 ,
GSM576151 ,
GSM576152 ,
GSM576153 ,
GSM576154 ,
GSM576155 ,
GSM576156 ,
GSM576157 ,
GSM576158 ,
GSM576159 ,
GSM576160 ,
GSM576161 ,
GSM576162 ,
GSM576163 ,
GSM576164 ,
GSM576165 ,
GSM576166 ,
GSM576167 ,
GSM576168 ,
GSM576169 ,
GSM576170 ,
GSM576171 ,
GSM576172 ,
GSM576173 ,
GSM576174 ,
GSM576175 ,
GSM576176 ,
GSM576177 ,
GSM576178 ,
GSM576179 ,
GSM576180 ,
GSM576181 ,
GSM576182 ,
GSM576183 ,
GSM576184 ,
GSM576185 ,
GSM576186 ,
GSM576187 ,
GSM576188 ,
GSM576189 ,
GSM576190 ,
GSM576191 ,
GSM576192 ,
GSM576193 ,
GSM576194 ,
GSM576195 ,
GSM576196 ,
GSM576197 ,
GSM576198 ,
GSM576199 ,
GSM576200 ,
GSM576201 ,
GSM576202 ,
GSM576203 ,
GSM576204 ,
GSM576205 ,
GSM576206 ,
GSM576207 ,
GSM576208 ,
GSM576209 ,
GSM576210 ,
GSM576211 ,
GSM576212 ,
GSM576213 ,
GSM576214 ,
GSM576215 ,
GSM576216 ,
GSM576217 ,
GSM576218 ,
GSM576219 ,
GSM576220 ,
GSM576221 ,
GSM576222 ,
GSM576223 ,
GSM576224 ,
GSM576225 ,
GSM576226 ,
GSM576227 ,
GSM576228 ,
GSM576229 ,
GSM576230 ,
GSM576231 ,
GSM576232 ,
GSM576233 ,
GSM576234 ,
GSM576235 ,
GSM576236 ,
GSM576237 ,
GSM576238 ,
GSM576239 ,
GSM576240 ,
GSM576241 ,
GSM576242 ,
GSM576243 ,
GSM576244 ,
GSM576245 ,
GSM576246 ,
GSM576247 ,
GSM576248 ,
GSM576249 ,
GSM576250 ,
GSM576251 ,
GSM576252 ,
GSM576253 ,
GSM576254 ,
GSM576255 ,
GSM576256 ,
GSM576257 ,
GSM576258 ,
GSM576259 ,
GSM576260 ,
GSM576261 ,
GSM576262 ,
GSM576263 ,
GSM576264 ,
GSM576265 ,
GSM576266 ,
GSM576267 ,
GSM576268 ,
GSM576269 ,
GSM576270 ,
GSM576271 ,
GSM576272 ,
GSM576273 ,
GSM576274 ,
GSM576275 ,
GSM576276 ,
GSM576277 ,
GSM576278 ,
GSM576279 ,
GSM576280 ,
GSM576281 ,
GSM576282 ,
GSM576283 ,
GSM576284 ,
GSM576285 ,
GSM576286 ,
GSM576287 ,
GSM576288 ,
GSM576289 ,
GSM576290 ,
GSM576291 ,
GSM576292 ,
GSM576293 ,
GSM576294 ,
GSM576295 ,
GSM576296 ,
GSM576297 ,
GSM576298 ,
GSM576299 ,
GSM576300 ,
GSM576301 ,
GSM576302 ,
GSM576303 ,
GSM576304 ,
GSM576305 ,
GSM576306 ,
GSM576307 ,
GSM576308 ,
GSM576309 ,
GSM576310 ,
GSM576311 ,
GSM576312 ,
GSM576313 ,
GSM576314 ,
GSM576315 ,
GSM576316 ,
GSM576317 ,
GSM576318 ,
GSM576319 ,
GSM576320 ,
GSM576321 ,
GSM576322 ,
GSM576323 ,
GSM576324 ,
GSM576325 ,
GSM576326 ,
GSM576327 ,
GSM576328 ,
GSM576329 ,
GSM576330 ,
GSM576331 ,
GSM576332 ,
GSM576333 ,
GSM576334 ,
GSM576335 ,
GSM576336 ,
GSM576337 ,
GSM576338 ,
GSM576339 ,
GSM576340 ,
GSM576341 ,
GSM576342 ,
GSM576343 ,
GSM576344 ,
GSM576345 ,
GSM576346 ,
GSM576347 ,
GSM576348 ,
GSM576349 ,
GSM576350 ,
GSM576351 ,
GSM576352 ,
GSM576353 ,
GSM576354 ,
GSM576355 ,
GSM576356 ,
GSM576357 ,
GSM576358 ,
GSM576359 ,
GSM576360 ,
GSM576361 ,
GSM576362 ,
GSM576363 ,
GSM576364 ,
GSM576365 ,
GSM576366 ,
GSM576367 ,
GSM576368 ,
GSM576369 ,
GSM576370 ,
GSM576371 ,
GSM576372 ,
GSM576373 ,
GSM576374 ,
GSM576375 ,
GSM576376 ,
GSM576377 ,
GSM576378 ,
GSM576379 ,
GSM576380 ,
GSM576381 ,
GSM576382 ,
GSM576383 ,
GSM576384 ,
GSM576385 ,
GSM576386 ,
GSM576387 ,
GSM576388 ,
GSM576389 ,
GSM576390 ,
GSM576391 ,
GSM576392 ,
GSM576393 ,
GSM576394 ,
GSM576395 ,
GSM576396 ,
GSM576397 ,
GSM576398 ,
GSM576399 ,
GSM576400 ,
GSM576401 ,
GSM576402 ,
GSM576403 ,
GSM576404 ,
GSM576405 ,
GSM576406 ,
GSM576407 ,
GSM576408 ,
GSM576409 ,
GSM576410 ,
GSM576411 ,
GSM576412 ,
GSM576413 ,
GSM576414 ,
GSM576415 ,
GSM576416 ,
GSM576417 ,
GSM576418 ,
GSM576419 ,
GSM576420 ,
GSM576421 ,
GSM576422 ,
GSM576423 ,
GSM576424 ,
GSM576425 ,
GSM576426 ,
GSM576427 ,
GSM576428 ,
GSM576429 ,
GSM576430 ,
GSM576431 ,
GSM576432 ,
GSM576433 ,
GSM576434 ,
GSM576435 ,
GSM576436 ,
GSM576437 ,
GSM576438 ,
GSM576439 ,
GSM576440 ,
GSM576441 ,
GSM576442 ,
GSM576443 ,
GSM576444 ,
GSM576445 ,
GSM576446 ,
GSM576447 ,
GSM576448 ,
GSM576449 ,
GSM576450 ,
GSM576451 ,
GSM576452 ,
GSM576453 ,
GSM576454 ,
GSM576455 ,
GSM576456 ,
GSM576457 ,
GSM576458 ,
GSM576459 ,
GSM576460 ,
GSM576461 ,
GSM576462 ,
GSM576463 ,
GSM576464 ,
GSM576465 ,
GSM576466 ,
GSM576467 ,
GSM576468 ,
GSM576469 ,
GSM576470 ,
GSM576471 ,
GSM576472 ,
GSM576473 ,
GSM576474 ,
GSM576475 ,
GSM576476 ,
GSM576477 ,
GSM576478 ,
GSM576479 ,
GSM576480 ,
GSM576481 ,
GSM576482 ,
GSM576483 ,
GSM576484 ,
GSM576485 ,
GSM576486 ,
GSM576487 ,
GSM576488 ,
GSM576489 ,
GSM576490 ,
GSM576491 ,
GSM576492 ,
GSM576493 ,
GSM576494 ,
GSM576495 ,
GSM576496 ,
GSM576497 ,
GSM576498 ,
GSM576499 ,
GSM576500 ,
GSM576501 ,
GSM576502 ,
GSM576503 ,
GSM576504 ,
GSM576505 ,
GSM576506 ,
GSM576507 ,
GSM576508 ,
GSM576509 ,
GSM576510 ,
GSM576511 ,
GSM576512 ,
GSM576513 ,
GSM576514 ,
GSM576515 ,
GSM576516 ,
GSM576517 ,
GSM576518 ,
GSM576519 ,
GSM576520 ,
GSM576521 ,
GSM576522 ,
GSM576523 ,
GSM576524 ,
GSM576525 ,
GSM576526 ,
GSM576527 ,
GSM576528 ,
GSM576529 ,
GSM576530 ,
GSM576531 ,
GSM576532 ,
GSM576533 ,
GSM576534 ,
GSM576535 ,
GSM576536 ,
GSM576537 ,
GSM576538 ,
GSM576539 ,
GSM576540 ,
GSM576541 ,
GSM576542 ,
GSM576543 ,
GSM576544 ,
GSM576545 ,
GSM576546 ,
GSM576547 ,
GSM576548 ,
GSM576549 ,
GSM576550 ,
GSM576551 ,
GSM576552 ,
GSM576553 ,
GSM576554 ,
GSM576555 ,
GSM576556 ,
GSM576557 ,
GSM576558 ,
GSM576559 ,
GSM576560 ,
GSM576561 ,
GSM576562 ,
GSM576563 ,
GSM576564 ,
GSM576565 ,
GSM576566 ,
GSM576567 ,
GSM576568 ,
GSM576569 ,
GSM576570 ,
GSM576571 ,
GSM576572 ,
GSM576573 ,
GSM576574 ,
GSM576575 ,
GSM576576 ,
GSM576577 ,
GSM576578 ...
Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here Series (19)
GSE22209 Reduced seed region-based off-target activity with lentivirus-mediated RNAi
GSE22396 Gene expression analysis of Merkel Cell Carcinoma
GSE23352 Whole-genome gene expression profiles of non-tumorous human lung tissues: Laval set
GSE23529 Whole-genome gene expression profiles of non-tumorous human lung tissues: UBC set
GSE23545 Whole-genome gene expression profiles of non-tumorous human lung tissues: GRNG set
GSE23546 Whole-genome gene expression profiles of non-tumorous human lung tissues
GSE25224 Persistence of seed-based activity following microRNA segmentation
GSE28567 EMT is the dominant program in human colon cancer (Affymetrix)
GSE28814 EMT is the dominant program in human colon cancer
GSE43950 Gene expression profiling in endothelial precursor cells of patients protected from microvascular complications
GSE46141 Expression data from fine-needle aspiration biopsies of breast cancer metastases from different anatomical sites
GSE48091 A nested case-control study to investigate drivers for metastatic disease in breast cancer
GSE56493 Expression data from fine-needle aspiration biopsies of breast cancer metastases from different anatomical sites
GSE56931 Blood gene expression reveals reduced circadian rhythmicity in individuals resistant to sleep deprivation
GSE58795 Whole blood gene expression profiling of rheumatoid arthritis patients
GSE59242 Profiling of human cancer breast cell lines (Affymetrix)
GSE67200 A Randomized Clinical Trial to Study the Effects of Single Doses of Corticosteroid on Response to Nasal Allergen Challenge in Patients
GSE81954 A nested case-control study to investigate drivers for metastatic disease in breast cancer (QC substudy)
GSE110226 Comparative Transcriptomics of Choroid Plexus in Alzheimer's Disease, Huntington's Disease and Frontotemporal Dementia: Implications for CSF Homeostasis and Dynamics
Data table header descriptions ID EntrezGeneID Entrez Gene identifier for the gene represented
GeneSymbol Gene symbol for the gene represented
GB_ACC GenBank or RefSeq accession
miRNA_ID miRNA identifier
ORF open reading frame designator
PROBE_DERIVED_FROM_TRANSCRIPT Actual transcript sequence from which the probe was derived
SPOT_ID RosettaGeneModelID Rosetta internal gene identifier
Data table ID EntrezGeneID GeneSymbol GB_ACC miRNA_ID ORF PROBE_DERIVED_FROM_TRANSCRIPT SPOT_ID RosettaGeneModelID 100138926_TGI_at
6566 SLC16A1
BC026317 BC026317
HSG00206767
100131045_TGI_at
BX098869 BX098869
HSG00284033
100134882_TGI_at
3458 IFNG
NM_000619 NM_000619
HSG00277939
100149534_TGI_at
51552 RAB14
AK090889 AK090889
HSG00261054
100160054_TGI_at
64848 YTHDC2
AK131450 AK131450
HSG00236721
100146505_TGI_at
AL133618 AL133618
HSG00313131
100140938_TGI_at
BC033700 BC033700
HSG00259642
100132399_TGI_at
8452 CUL3
NM_003590 NM_003590
HSG00214321
100152215_TGI_at
283742 FAM98B
FAM98B non-public
ENSEMBL:ENST00000305752
HSG00290594
100147785_TGI_at
10048 RANBP9
NM_005493 NM_005493
HSG00243998
100138290_TGI_at
9857 CEP350
CEP350 non-public
ENSEMBL:ENST00000357434
HSG00201115
100135090_TGI_at
613209 DEFB135
NM_001033017 NM_001033017
HSG00432917
100310799_TGI_at
127 ADH4
AV648121 AV648121
HSG00228552
100123722_TGI_at
10202 DHRS2
NM_005794 NM_005794
HSG00288471
100311433_TGI_at
79705 LRRK1
AK225575 AK225575
HSG00289852
100137544_TGI_at
2184 FAH
NM_000137 NM_000137
HSG00291601
100142142_TGI_at
10663 CXCR6
NM_006564 NM_006564
HSG00221302
100129675_TGI_at
AK026195 AK026195
HSG00265920
100307002_TGI_at
54516 MTRF1L
BQ961571 BQ961571
HSG00244590
100144445_TGI_at
57556 SEMA6A
SEMA6A non-public
ENSEMBL:ENST00000257414
HSG00237491
52378 3197 Kbytes .Supplementary file Size Download File type/resource GPL10379_HuRSTA-2a520709_custom_MMPM.cdf.gz
14.8 Mb
(ftp) (http) CDF
GPL10379_probe_sequences.txt.gz
6.6 Mb
(ftp) (http) TXT
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