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    LOC6617015 protein groucho [ Drosophila sechellia ]

    Gene ID: 6617015, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC6617015
    Gene description
    protein groucho
    Locus tag
    Dsec_GM10302
    See related
    EnsemblRapid:LOC6617015
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila sechellia
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    GM10302; GM10302-PA
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC6617015 in Genome Data Viewer
    Location:
    chromosome: 3R
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    101 current ASM438219v1 (GCF_004382195.1) 3R NC_045952.1 (24588737..24595965)

    Chromosome 3R - NC_045952.1Genomic Context describing neighboring genes Neighboring gene Enhancer of split m7, helix-loop-helix Neighboring gene Enhancer of split m8, helix-loop-helix Neighboring gene exocyst complex component 8 Neighboring gene vacuolar protein sorting 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_045952.1 Chromosome 3R Reference ASM438219v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein groucho
    Names
    Dsec\GM10302
    Dsec\GM10302-PA
    dsec_GLEANR_10321

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM438219v1

    Genomic

    1. NC_045952.1 Reference ASM438219v1

      Range
      24588737..24595965
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002041307.2 → XP_002041343.1  protein groucho isoform X1

      See identical proteins and their annotated locations for XP_002041343.1

      UniProtKB/TrEMBL
      B4ICI5
      Related
      XP_002041343.1, XM_002041307.2
      Conserved Domains (3) summary
      cd00200
      Location:442 → 727
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:447 → 486
      7WD40; WD40 repeat [structural motif]
      pfam03920
      Location:11 → 124
      TLE_N; Groucho/TLE N-terminal Q-rich domain

    2. XM_032722951.1 → XP_032578842.1  protein groucho isoform X2

      Related
      XP_032578842.1, XM_032722951.1
      Conserved Domains (3) summary
      cd00200
      Location:431 → 716
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:436 → 475
      7WD40; WD40 repeat [structural motif]
      pfam03920
      Location:11 → 133
      TLE_N; Groucho/TLE N-terminal Q-rich domain

    3. XM_032722952.1 → XP_032578843.1  protein groucho isoform X3

      Related
      XP_032578843.1, XM_032722952.1
      Conserved Domains (3) summary
      cd00200
      Location:429 → 714
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:434 → 473
      7WD40; WD40 repeat [structural motif]
      pfam03920
      Location:11 → 133
      TLE_N; Groucho/TLE N-terminal Q-rich domain

    4. XM_032722949.1 → XP_032578840.1  protein groucho isoform X1

      UniProtKB/TrEMBL
      B4ICI5
      Related
      XP_032578840.1, XM_032722949.1
      Conserved Domains (3) summary
      cd00200
      Location:442 → 727
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:447 → 486
      7WD40; WD40 repeat [structural motif]
      pfam03920
      Location:11 → 124
      TLE_N; Groucho/TLE N-terminal Q-rich domain

    5. XM_032722950.1 → XP_032578841.1  protein groucho isoform X1

      UniProtKB/TrEMBL
      B4ICI5
      Related
      XP_032578841.1, XM_032722950.1
      Conserved Domains (3) summary
      cd00200
      Location:442 → 727
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:447 → 486
      7WD40; WD40 repeat [structural motif]
      pfam03920
      Location:11 → 124
      TLE_N; Groucho/TLE N-terminal Q-rich domain
    Nucleotide Protein Strain
    Heading Accession and Version

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