gadd45gip1 growth arrest and DNA damage-inducible proteins-interacting protein 1 [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: gadd45gip1provided by Xenbase
Official Full Name: growth arrest and DNA damage-inducible proteins-interacting protein 1provided by Xenbase
Primary source: Xenbase:XB-GENE-992637
See related: Ensembl:ENSXETG00000007940
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as: prg6; crif1; ckbbp2; plinp1; plinp-1
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 3

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	3	NC_030679.2 (139677240..139680415)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	3	NC_030679.1 (128785874..128789376)

Chromosome 3 - NC_030679.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by Xenbase

Component	Evidence Code	Pubs
located_in mitochondrion	IEA Inferred from Electronic Annotation more info
located_in nucleus	IEA Inferred from Electronic Annotation more info
part_of ribonucleoprotein complex	IEA Inferred from Electronic Annotation more info
located_in ribosome	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: large ribosomal subunit protein mL64

Names: GADD45G interacting protein 1; growth arrest and DNA-damage-inducible, gamma interacting protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001310101.1 → NP_001297030.1 large ribosomal subunit protein mL64

See identical proteins and their annotated locations for NP_001297030.1

Status: PROVISIONAL

Source sequence(s)

CR855660

UniProtKB/TrEMBL

F6R2Y9, Q28D76

Related

ENSXETP00000017409.3, ENSXETT00000017409.4

Conserved Domains (2) summary

pfam10147
Location:39 → 199

CR6_interact; Growth arrest and DNA-damage-inducible proteins-interacting protein 1

cl05005
Location:95 → 158

TAF4; TATA Binding Protein (TBP) Associated Factor 4 (TAF4) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex