U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    acsf3 acyl-CoA synthetase family member 3 [ Austrofundulus limnaeus ]

    Gene ID: 106513917, updated on 13-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    acsf3
    Gene description
    acyl-CoA synthetase family member 3
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Austrofundulus limnaeus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Austrofundulus
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    human zebrafish all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See acsf3 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    100 current Austrofundulus_limnaeus-1.0 (GCF_001266775.1) Unplaced Scaffold NW_013952418.1 (3960531..4007561)

    NW_013952418.1Genomic Context describing neighboring genes Neighboring gene galactosamine (N-acetyl)-6-sulfatase Neighboring gene CBFA2/RUNX1 partner transcriptional co-repressor 3 Neighboring gene cadherin 15, type 1, M-cadherin (myotubule) Neighboring gene SPG7 matrix AAA peptidase subunit, paraplegin

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_013952418.1 Unplaced Scaffold Reference Austrofundulus_limnaeus-1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables medium-chain fatty acid-CoA ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fatty acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    acyl-CoA synthetase family member 3, mitochondrial

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Austrofundulus limnaeus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Austrofundulus_limnaeus-1.0

    Genomic

    1. NW_013952418.1 Reference Austrofundulus_limnaeus-1.0

      Range
      3960531..4007561
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014002981.1 → XP_013858435.1  acyl-CoA synthetase family member 3, mitochondrial

      UniProtKB/TrEMBL
      A0A2I4ASH2
      Conserved Domains (2) summary
      cd05941
      Location:68 → 661
      MCS; Malonyl-CoA synthetase (MCS)
      COG0318
      Location:65 → 664
      CaiC; Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Lipid transport and metabolism, Secondary metabolites biosynthesis, transport and catabolism]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.