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    LOC104590188 uncharacterized protein At4g06598 [ Nelumbo nucifera (sacred lotus) ]

    Gene ID: 104590188, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC104590188
    Gene description
    uncharacterized protein At4g06598
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nelumbo nucifera
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Proteales; Nelumbonaceae; Nelumbo
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    Genomic context

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    See LOC104590188 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    101 current Chinese Lotus 1.1 (GCF_000365185.1) Unplaced Scaffold NW_010729078.1 (6821404..6830610, complement)

    NW_010729078.1Genomic Context describing neighboring genes Neighboring gene receptor protein kinase TMK1-like Neighboring gene receptor protein kinase TMK1-like Neighboring gene uncharacterized LOC104590234 Neighboring gene digalactosyldiacylglycerol synthase 1, chloroplastic

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_010729078.1 Unplaced Scaffold Reference Chinese Lotus 1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    basic leucine zipper 6; uncharacterized protein At4g06598

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Nelumbo nucifera Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Chinese Lotus 1.1 Primary Assembly

    Genomic

    1. NW_010729078.1 Reference Chinese Lotus 1.1 Primary Assembly

      Range
      6821404..6830610 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010248781.2 → XP_010247083.1  uncharacterized protein At4g06598 isoform X1

      See identical proteins and their annotated locations for XP_010247083.1

      UniProtKB/TrEMBL
      A0A1U7ZHF9, A0A822ZV28
      Conserved Domains (1) summary
      cd14703
      Location:182 → 227
      bZIP_plant_RF2; Basic leucine zipper (bZIP) domain of Plant RF2-like transcription factors: a DNA-binding and dimerization domain

    2. XM_010248765.2 → XP_010247067.1  uncharacterized protein At4g06598 isoform X1

      See identical proteins and their annotated locations for XP_010247067.1

      UniProtKB/TrEMBL
      A0A1U7ZHF9, A0A822ZV28
      Conserved Domains (1) summary
      cd14703
      Location:182 → 227
      bZIP_plant_RF2; Basic leucine zipper (bZIP) domain of Plant RF2-like transcription factors: a DNA-binding and dimerization domain

    3. XM_010248774.2 → XP_010247076.1  uncharacterized protein At4g06598 isoform X1

      See identical proteins and their annotated locations for XP_010247076.1

      UniProtKB/TrEMBL
      A0A1U7ZHF9, A0A822ZV28
      Conserved Domains (1) summary
      cd14703
      Location:182 → 227
      bZIP_plant_RF2; Basic leucine zipper (bZIP) domain of Plant RF2-like transcription factors: a DNA-binding and dimerization domain

    4. XM_019196437.1 → XP_019051982.1  basic leucine zipper 6 isoform X2

      UniProtKB/TrEMBL
      A0A1U8PZM5, A0A822ZV28

    5. XM_010248751.2 → XP_010247053.1  uncharacterized protein At4g06598 isoform X1

      See identical proteins and their annotated locations for XP_010247053.1

      UniProtKB/TrEMBL
      A0A1U7ZHF9, A0A822ZV28
      Conserved Domains (1) summary
      cd14703
      Location:182 → 227
      bZIP_plant_RF2; Basic leucine zipper (bZIP) domain of Plant RF2-like transcription factors: a DNA-binding and dimerization domain

    6. XM_010248757.2 → XP_010247059.1  uncharacterized protein At4g06598 isoform X1

      See identical proteins and their annotated locations for XP_010247059.1

      UniProtKB/TrEMBL
      A0A1U7ZHF9, A0A822ZV28
      Conserved Domains (1) summary
      cd14703
      Location:182 → 227
      bZIP_plant_RF2; Basic leucine zipper (bZIP) domain of Plant RF2-like transcription factors: a DNA-binding and dimerization domain

    7. XM_010248799.2 → XP_010247101.1  uncharacterized protein At4g06598 isoform X3

      UniProtKB/TrEMBL
      A0A1U7ZG71
      Conserved Domains (1) summary
      cd14703
      Location:182 → 227
      bZIP_plant_RF2; Basic leucine zipper (bZIP) domain of Plant RF2-like transcription factors: a DNA-binding and dimerization domain

    RNA

    1. XR_734088.2 RNA Sequence

    2. XR_734090.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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