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    GAS2L1 growth arrest specific 2 like 1 [ Gallus gallus (chicken) ]

    Gene ID: 100859584, updated on 17-Aug-2024

    Summary

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    Symbol
    GAS2L1provided by CGNC
    Full Name
    growth arrest specific 2 like 1provided by CGNC
    Primary source
    CGNC:63561
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See GAS2L1 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 15 NC_052546.1 (11146169..11154037, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 15 NC_052587.1 (11158346..11166034, complement)

    Chromosome 15 - NC_052546.1Genomic Context describing neighboring genes Neighboring gene neurofilament heavy polypeptide Neighboring gene adaptor related protein complex 1 beta 1 subunit Neighboring gene small nucleolar RNA SNORD125 Neighboring gene EWS RNA binding protein 1 Neighboring gene EMI domain containing 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables cytoskeletal anchor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin crosslink formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in microtubule bundle formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to microtubule plus-end IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of microtubule polymerization or depolymerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in microtubule plus-end IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in stress fiber IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    GAS2-like protein 1; LOW QUALITY PROTEIN: GAS2-like protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052546.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      11146169..11154037 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015294897.4 → XP_015150383.3  LOW QUALITY PROTEIN: GAS2-like protein 1

      Conserved Domains (4) summary
      smart00243
      Location:209 → 281
      GAS2; Growth-Arrest-Specific Protein 2 Domain
      PHA03247
      Location:288 → 698
      PHA03247; large tegument protein UL36; Provisional
      COG5199
      Location:101 → 161
      SCP1; Calponin [Cytoskeleton]
      cl00030
      Location:30 → 144
      CH_SF; calponin homology (CH) domain superfamily

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052587.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      11158346..11166034 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040685183.2 → XP_040541117.1  GAS2-like protein 1

      Conserved Domains (4) summary
      smart00243
      Location:209 → 281
      GAS2; Growth-Arrest-Specific Protein 2 Domain
      PHA03247
      Location:288 → 698
      PHA03247; large tegument protein UL36; Provisional
      COG5199
      Location:101 → 161
      SCP1; Calponin [Cytoskeleton]
      cl00030
      Location:30 → 144
      CH_SF; calponin homology (CH) domain superfamily
    Nucleotide Protein Strain
    Heading Accession and Version

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