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    ankrd34c ankyrin repeat domain 34C [ Danio rerio (zebrafish) ]

    Gene ID: 566743, updated on 27-Mar-2024

    Summary

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    Official Symbol
    ankrd34cprovided by ZNC
    Official Full Name
    ankyrin repeat domain 34Cprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-121105-3
    See related
    Ensembl:ENSDARG00000093286 AllianceGenome:ZFIN:ZDB-GENE-121105-3
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Orthologous to human ANKRD34C (ankyrin repeat domain 34C). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    human mouse all
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    Genomic context

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    See ankrd34c in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 18 NC_007129.7 (26121905..26127772, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 18 NC_007129.6 (26137554..26143117, complement)

    Chromosome 18 - NC_007129.7Genomic Context describing neighboring genes Neighboring gene zinc finger protein 710a Neighboring gene isocitrate dehydrogenase (NADP(+)) 2 Neighboring gene microRNA 184 Neighboring gene Ras protein specific guanine nucleotide releasing factor 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    ankyrin repeat domain-containing protein 34C

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007129.7 Reference GRCz11 Primary Assembly

      Range
      26121905..26127772 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003200458.5 → XP_003200506.1  ankyrin repeat domain-containing protein 34C

      See identical proteins and their annotated locations for XP_003200506.1

      UniProtKB/TrEMBL
      A0A8M1RFK1, F1QC31
      Related
      ENSDARP00000120378.2, ENSDART00000145875.2
      Conserved Domains (3) summary
      cd00204
      Location:31 → 138
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam13637
      Location:45 → 105
      Ank_4; Ankyrin repeats (many copies)
      sd00045
      Location:42 → 81
      ANK; ANK repeat [structural motif]
    Nucleotide Protein Strain
    Heading Accession and Version

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