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    FATE1 fetal and adult testis expressed 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 481076, updated on 17-Aug-2024

    Summary

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    Official Symbol
    FATE1provided by VGNC
    Official Full Name
    fetal and adult testis expressed 1provided by VGNC
    Primary source
    VGNC:VGNC:40746
    See related
    Ensembl:ENSCAFG00845025266
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human all
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    Genomic context

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    See FATE1 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) X NC_051843.1 (121895797..121902455)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) X NC_006621.4 (105057988..105064646)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) X NC_049260.1 (120981604..120988262)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) X NC_049299.1 (118616049..118622707)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) X NC_049780.1 (121098992..121105650)

    Chromosome X - NC_051843.1Genomic Context describing neighboring genes Neighboring gene PAS domain containing repressor 1 Neighboring gene mitogen-activated protein kinase kinase kinase kinase 4-like Neighboring gene proline rich and Gla domain 3 Neighboring gene cyclic nucleotide gated channel subunit alpha 2 Neighboring gene thioredoxin-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin protein ligase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of apoptotic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of mitochondrial calcium ion concentration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondria-associated endoplasmic reticulum membrane contact site IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrial outer membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    fetal and adult testis-expressed transcript protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051843.1 Reference ROS_Cfam_1.0

      Range
      121895797..121902455
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038451138.1 → XP_038307066.1  fetal and adult testis-expressed transcript protein

      UniProtKB/TrEMBL
      A0A8C0R6G8, A0A8C0R6J1, A0A8C0SMQ7, A0A8I3Q6E3
      Related
      ENSCAFP00845034920.1, ENSCAFT00845044574.1
      Conserved Domains (1) summary
      pfam05644
      Location:85 → 182
      Miff; Mitochondrial and peroxisomal fission factor Mff

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049299.1 Alternate UMICH_Zoey_3.1

      Range
      118616049..118622707
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038524611.1 → XP_038380539.1  fetal and adult testis-expressed transcript protein

      Conserved Domains (1) summary
      pfam05644
      Location:85 → 182
      Miff; Mitochondrial and peroxisomal fission factor Mff

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049780.1 Alternate UNSW_CanFamBas_1.0

      Range
      121098992..121105650
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038653085.1 → XP_038509013.1  fetal and adult testis-expressed transcript protein

      Conserved Domains (1) summary
      pfam05644
      Location:85 → 182
      Miff; Mitochondrial and peroxisomal fission factor Mff

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049260.1 Alternate UU_Cfam_GSD_1.0

      Range
      120981604..120988262
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038588579.1 → XP_038444507.1  fetal and adult testis-expressed transcript protein

      UniProtKB/TrEMBL
      A0A8C0R6G8, A0A8C0R6J1, A0A8C0SMQ7, A0A8I3Q6E3
      Conserved Domains (1) summary
      pfam05644
      Location:85 → 182
      Miff; Mitochondrial and peroxisomal fission factor Mff

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006621.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      105057988..105064646
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_538196.6 → XP_538196.1  fetal and adult testis-expressed transcript protein

      UniProtKB/TrEMBL
      A0A8C0R6G8, A0A8C0R6J1, A0A8C0SMQ7, A0A8I3Q6E3
      Conserved Domains (1) summary
      pfam05644
      Location:85 → 182
      Miff; Mitochondrial and peroxisomal fission factor Mff
    Nucleotide Protein
    Heading Accession and Version

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