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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference ROS_Cfam_1.0
Genomic
-
NC_051824.1 Reference ROS_Cfam_1.0
- Range
-
51393895..51450128
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038428674.1 → XP_038284602.1 DNA (cytosine-5)-methyltransferase 1 isoform X2
- UniProtKB/TrEMBL
-
A0A8C0RQ92
- Conserved Domains (6) summary
-
- COG0270
Location:1110 → 1568
- Dcm; Site-specific DNA-cytosine methylase [Replication, recombination and repair]
- cd04711
Location:937 → 1073
- BAH_Dnmt1_II; BAH, or Bromo Adjacent Homology domain, second copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- cd04760
Location:726 → 849
- BAH_Dnmt1_I; BAH, or Bromo Adjacent Homology domain, first copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- pfam02008
Location:617 → 663
- zf-CXXC; CXXC zinc finger domain
- pfam06464
Location:3 → 81
- DMAP_binding; DMAP1-binding Domain
- pfam12047
Location:373 → 506
- DNMT1-RFD; Cytosine specific DNA methyltransferase replication foci domain
-
XM_038428672.1 → XP_038284600.1 DNA (cytosine-5)-methyltransferase 1 isoform X3
- UniProtKB/TrEMBL
- A0A8C0RQ92, A0A8I3NUZ2, A0A8P0SM11
- Related
- ENSCAFP00845025238.1, ENSCAFT00845032287.1
- Conserved Domains (6) summary
-
- COG0270
Location:1135 → 1593
- Dcm; Site-specific DNA-cytosine methylase [Replication, recombination and repair]
- cd04711
Location:962 → 1098
- BAH_Dnmt1_II; BAH, or Bromo Adjacent Homology domain, second copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- cd04760
Location:751 → 874
- BAH_Dnmt1_I; BAH, or Bromo Adjacent Homology domain, first copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- pfam02008
Location:642 → 688
- zf-CXXC; CXXC zinc finger domain
- pfam06464
Location:17 → 106
- DMAP_binding; DMAP1-binding Domain
- pfam12047
Location:398 → 531
- DNMT1-RFD; Cytosine specific DNA methyltransferase replication foci domain
-
XM_038428673.1 → XP_038284601.1 DNA (cytosine-5)-methyltransferase 1 isoform X1
- UniProtKB/TrEMBL
-
A0A8C0RQ92
- Conserved Domains (6) summary
-
- COG0270
Location:1127 → 1585
- Dcm; Site-specific DNA-cytosine methylase [Replication, recombination and repair]
- cd04711
Location:954 → 1090
- BAH_Dnmt1_II; BAH, or Bromo Adjacent Homology domain, second copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- cd04760
Location:743 → 866
- BAH_Dnmt1_I; BAH, or Bromo Adjacent Homology domain, first copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- pfam02008
Location:634 → 680
- zf-CXXC; CXXC zinc finger domain
- pfam06464
Location:20 → 98
- DMAP_binding; DMAP1-binding Domain
- pfam12047
Location:390 → 523
- DNMT1-RFD; Cytosine specific DNA methyltransferase replication foci domain
-
XM_038428675.1 → XP_038284603.1 DNA (cytosine-5)-methyltransferase 1 isoform X4
- UniProtKB/TrEMBL
-
A0A8C0RQ92
- Conserved Domains (5) summary
-
- COG0270
Location:905 → 1363
- Dcm; Site-specific DNA-cytosine methylase [Replication, recombination and repair]
- cd04711
Location:732 → 868
- BAH_Dnmt1_II; BAH, or Bromo Adjacent Homology domain, second copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- cd04760
Location:521 → 644
- BAH_Dnmt1_I; BAH, or Bromo Adjacent Homology domain, first copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- pfam02008
Location:412 → 458
- zf-CXXC; CXXC zinc finger domain
- pfam12047
Location:168 → 301
- DNMT1-RFD; Cytosine specific DNA methyltransferase replication foci domain
Alternate UMICH_Zoey_3.1
Genomic
-
NC_049280.1 Alternate UMICH_Zoey_3.1
- Range
-
50599735..50657798
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038504318.1 → XP_038360246.1 DNA (cytosine-5)-methyltransferase 1 isoform X7
-
XM_038504315.1 → XP_038360243.1 DNA (cytosine-5)-methyltransferase 1 isoform X5
-
XM_038504316.1 → XP_038360244.1 DNA (cytosine-5)-methyltransferase 1 isoform X3
- Conserved Domains (6) summary
-
- COG0270
Location:1135 → 1593
- Dcm; Site-specific DNA-cytosine methylase [Replication, recombination and repair]
- cd04711
Location:962 → 1098
- BAH_Dnmt1_II; BAH, or Bromo Adjacent Homology domain, second copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- cd04760
Location:751 → 874
- BAH_Dnmt1_I; BAH, or Bromo Adjacent Homology domain, first copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- pfam02008
Location:642 → 688
- zf-CXXC; CXXC zinc finger domain
- pfam06464
Location:17 → 106
- DMAP_binding; DMAP1-binding Domain
- pfam12047
Location:398 → 531
- DNMT1-RFD; Cytosine specific DNA methyltransferase replication foci domain
-
XM_038504317.1 → XP_038360245.1 DNA (cytosine-5)-methyltransferase 1 isoform X6
-
XM_038504319.1 → XP_038360247.1 DNA (cytosine-5)-methyltransferase 1 isoform X4
- Conserved Domains (5) summary
-
- COG0270
Location:905 → 1363
- Dcm; Site-specific DNA-cytosine methylase [Replication, recombination and repair]
- cd04711
Location:732 → 868
- BAH_Dnmt1_II; BAH, or Bromo Adjacent Homology domain, second copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- cd04760
Location:521 → 644
- BAH_Dnmt1_I; BAH, or Bromo Adjacent Homology domain, first copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- pfam02008
Location:412 → 458
- zf-CXXC; CXXC zinc finger domain
- pfam12047
Location:168 → 301
- DNMT1-RFD; Cytosine specific DNA methyltransferase replication foci domain
Alternate UNSW_CanFamBas_1.0
Genomic
-
NC_049761.1 Alternate UNSW_CanFamBas_1.0
- Range
-
51028945..51085072
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038631498.1 → XP_038487426.1 DNA (cytosine-5)-methyltransferase 1 isoform X10
-
XM_038631495.1 → XP_038487423.1 DNA (cytosine-5)-methyltransferase 1 isoform X8
-
XM_038631496.1 → XP_038487424.1 DNA (cytosine-5)-methyltransferase 1 isoform X3
- Conserved Domains (6) summary
-
- COG0270
Location:1135 → 1593
- Dcm; Site-specific DNA-cytosine methylase [Replication, recombination and repair]
- cd04711
Location:962 → 1098
- BAH_Dnmt1_II; BAH, or Bromo Adjacent Homology domain, second copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- cd04760
Location:751 → 874
- BAH_Dnmt1_I; BAH, or Bromo Adjacent Homology domain, first copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- pfam02008
Location:642 → 688
- zf-CXXC; CXXC zinc finger domain
- pfam06464
Location:17 → 106
- DMAP_binding; DMAP1-binding Domain
- pfam12047
Location:398 → 531
- DNMT1-RFD; Cytosine specific DNA methyltransferase replication foci domain
-
XM_038631497.1 → XP_038487425.1 DNA (cytosine-5)-methyltransferase 1 isoform X9
-
XM_038631499.1 → XP_038487427.1 DNA (cytosine-5)-methyltransferase 1 isoform X4
- Conserved Domains (5) summary
-
- COG0270
Location:905 → 1363
- Dcm; Site-specific DNA-cytosine methylase [Replication, recombination and repair]
- cd04711
Location:732 → 868
- BAH_Dnmt1_II; BAH, or Bromo Adjacent Homology domain, second copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- cd04760
Location:521 → 644
- BAH_Dnmt1_I; BAH, or Bromo Adjacent Homology domain, first copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- pfam02008
Location:412 → 458
- zf-CXXC; CXXC zinc finger domain
- pfam12047
Location:168 → 301
- DNMT1-RFD; Cytosine specific DNA methyltransferase replication foci domain
Alternate UU_Cfam_GSD_1.0
Genomic
-
NC_049241.1 Alternate UU_Cfam_GSD_1.0
- Range
-
51269676..51325956
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038567349.1 → XP_038423277.1 DNA (cytosine-5)-methyltransferase 1 isoform X2
- UniProtKB/TrEMBL
-
A0A8C0RQ92
- Conserved Domains (6) summary
-
- COG0270
Location:1110 → 1568
- Dcm; Site-specific DNA-cytosine methylase [Replication, recombination and repair]
- cd04711
Location:937 → 1073
- BAH_Dnmt1_II; BAH, or Bromo Adjacent Homology domain, second copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- cd04760
Location:726 → 849
- BAH_Dnmt1_I; BAH, or Bromo Adjacent Homology domain, first copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- pfam02008
Location:617 → 663
- zf-CXXC; CXXC zinc finger domain
- pfam06464
Location:3 → 81
- DMAP_binding; DMAP1-binding Domain
- pfam12047
Location:373 → 506
- DNMT1-RFD; Cytosine specific DNA methyltransferase replication foci domain
-
XM_038567347.1 → XP_038423275.1 DNA (cytosine-5)-methyltransferase 1 isoform X3
- UniProtKB/TrEMBL
- A0A8C0RQ92, A0A8I3NUZ2, A0A8P0SM11
- Conserved Domains (6) summary
-
- COG0270
Location:1135 → 1593
- Dcm; Site-specific DNA-cytosine methylase [Replication, recombination and repair]
- cd04711
Location:962 → 1098
- BAH_Dnmt1_II; BAH, or Bromo Adjacent Homology domain, second copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- cd04760
Location:751 → 874
- BAH_Dnmt1_I; BAH, or Bromo Adjacent Homology domain, first copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- pfam02008
Location:642 → 688
- zf-CXXC; CXXC zinc finger domain
- pfam06464
Location:17 → 106
- DMAP_binding; DMAP1-binding Domain
- pfam12047
Location:398 → 531
- DNMT1-RFD; Cytosine specific DNA methyltransferase replication foci domain
-
XM_038567348.1 → XP_038423276.1 DNA (cytosine-5)-methyltransferase 1 isoform X1
- UniProtKB/TrEMBL
-
A0A8C0RQ92
- Conserved Domains (6) summary
-
- COG0270
Location:1127 → 1585
- Dcm; Site-specific DNA-cytosine methylase [Replication, recombination and repair]
- cd04711
Location:954 → 1090
- BAH_Dnmt1_II; BAH, or Bromo Adjacent Homology domain, second copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- cd04760
Location:743 → 866
- BAH_Dnmt1_I; BAH, or Bromo Adjacent Homology domain, first copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- pfam02008
Location:634 → 680
- zf-CXXC; CXXC zinc finger domain
- pfam06464
Location:20 → 98
- DMAP_binding; DMAP1-binding Domain
- pfam12047
Location:390 → 523
- DNMT1-RFD; Cytosine specific DNA methyltransferase replication foci domain
-
XM_038567350.1 → XP_038423278.1 DNA (cytosine-5)-methyltransferase 1 isoform X4
- UniProtKB/TrEMBL
-
A0A8C0RQ92
- Conserved Domains (5) summary
-
- COG0270
Location:905 → 1363
- Dcm; Site-specific DNA-cytosine methylase [Replication, recombination and repair]
- cd04711
Location:732 → 868
- BAH_Dnmt1_II; BAH, or Bromo Adjacent Homology domain, second copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- cd04760
Location:521 → 644
- BAH_Dnmt1_I; BAH, or Bromo Adjacent Homology domain, first copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- pfam02008
Location:412 → 458
- zf-CXXC; CXXC zinc finger domain
- pfam12047
Location:168 → 301
- DNMT1-RFD; Cytosine specific DNA methyltransferase replication foci domain
Alternate Dog10K_Boxer_Tasha Primary Assembly
Genomic
-
NC_006602.4 Alternate Dog10K_Boxer_Tasha Primary Assembly
- Range
-
50741748..50797884
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_022407068.2 → XP_022262776.1 DNA (cytosine-5)-methyltransferase 1 isoform X13
- UniProtKB/TrEMBL
-
A0A8C0RQ92
- Conserved Domains (7) summary
-
- COG0270
Location:1117 → 1575
- Dcm; Site-specific DNA-cytosine methylase [Replication, recombination and repair]
- cd04711
Location:944 → 1080
- BAH_Dnmt1_II; BAH, or Bromo Adjacent Homology domain, second copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- cd04760
Location:733 → 856
- BAH_Dnmt1_I; BAH, or Bromo Adjacent Homology domain, first copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- pfam02008
Location:624 → 670
- zf-CXXC; CXXC zinc finger domain
- pfam06464
Location:3 → 81
- DMAP_binding; DMAP1-binding Domain
- pfam10243
Location:151 → 338
- MIP-T3; Microtubule-binding protein MIP-T3
- pfam12047
Location:382 → 512
- DNMT1-RFD; Cytosine specific DNA methyltransferase replication foci domain
-
XM_022407066.2 → XP_022262774.1 DNA (cytosine-5)-methyltransferase 1 isoform X11
- UniProtKB/TrEMBL
-
A0A8C0RQ92
- Conserved Domains (7) summary
-
- COG0270
Location:1142 → 1600
- Dcm; Site-specific DNA-cytosine methylase [Replication, recombination and repair]
- cd04711
Location:969 → 1105
- BAH_Dnmt1_II; BAH, or Bromo Adjacent Homology domain, second copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- cd04760
Location:758 → 881
- BAH_Dnmt1_I; BAH, or Bromo Adjacent Homology domain, first copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- pfam02008
Location:649 → 695
- zf-CXXC; CXXC zinc finger domain
- pfam06464
Location:17 → 106
- DMAP_binding; DMAP1-binding Domain
- pfam10243
Location:176 → 363
- MIP-T3; Microtubule-binding protein MIP-T3
- pfam12047
Location:407 → 537
- DNMT1-RFD; Cytosine specific DNA methyltransferase replication foci domain
-
XM_533919.7 → XP_533919.5 DNA (cytosine-5)-methyltransferase 1 isoform X3
- UniProtKB/TrEMBL
- A0A8C0RQ92, A0A8I3NUZ2, A0A8P0SM11
- Conserved Domains (6) summary
-
- COG0270
Location:1135 → 1593
- Dcm; Site-specific DNA-cytosine methylase [Replication, recombination and repair]
- cd04711
Location:962 → 1098
- BAH_Dnmt1_II; BAH, or Bromo Adjacent Homology domain, second copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- cd04760
Location:751 → 874
- BAH_Dnmt1_I; BAH, or Bromo Adjacent Homology domain, first copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- pfam02008
Location:642 → 688
- zf-CXXC; CXXC zinc finger domain
- pfam06464
Location:17 → 106
- DMAP_binding; DMAP1-binding Domain
- pfam12047
Location:398 → 531
- DNMT1-RFD; Cytosine specific DNA methyltransferase replication foci domain
-
XM_022407067.2 → XP_022262775.1 DNA (cytosine-5)-methyltransferase 1 isoform X12
- UniProtKB/TrEMBL
-
A0A8C0RQ92
- Conserved Domains (7) summary
-
- COG0270
Location:1134 → 1592
- Dcm; Site-specific DNA-cytosine methylase [Replication, recombination and repair]
- cd04711
Location:961 → 1097
- BAH_Dnmt1_II; BAH, or Bromo Adjacent Homology domain, second copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- cd04760
Location:750 → 873
- BAH_Dnmt1_I; BAH, or Bromo Adjacent Homology domain, first copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- pfam02008
Location:641 → 687
- zf-CXXC; CXXC zinc finger domain
- pfam06464
Location:20 → 98
- DMAP_binding; DMAP1-binding Domain
- pfam10243
Location:168 → 355
- MIP-T3; Microtubule-binding protein MIP-T3
- pfam12047
Location:399 → 529
- DNMT1-RFD; Cytosine specific DNA methyltransferase replication foci domain
-
XM_038455410.1 → XP_038311338.1 DNA (cytosine-5)-methyltransferase 1 isoform X4
- UniProtKB/TrEMBL
-
A0A8C0RQ92
- Conserved Domains (5) summary
-
- COG0270
Location:905 → 1363
- Dcm; Site-specific DNA-cytosine methylase [Replication, recombination and repair]
- cd04711
Location:732 → 868
- BAH_Dnmt1_II; BAH, or Bromo Adjacent Homology domain, second copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- cd04760
Location:521 → 644
- BAH_Dnmt1_I; BAH, or Bromo Adjacent Homology domain, first copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
- pfam02008
Location:412 → 458
- zf-CXXC; CXXC zinc finger domain
- pfam12047
Location:168 → 301
- DNMT1-RFD; Cytosine specific DNA methyltransferase replication foci domain