The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference ROS_Cfam_1.0

Genomic

1. NC_051819.1 Reference ROS_Cfam_1.0

   Range

   6394522..6431156 complement

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_038687563.1 → XP_038543491.1  protein argonaute-1 isoform X4

   UniProtKB/TrEMBL

   A0A8C0QY26

   Related

   ENSCAFP00845043317.1, ENSCAFT00845055087.1

   Conserved Domains (4) summary

   cd02846
   Location:225 → 345

   PAZ_argonaute_like; PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille. ...

   cd04657
   Location:390 → 815

   Piwi_ago-like; PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing complex (RISC) and related complexes. The PIWI domain is the C-terminal portion of Argonaute and consists of two subdomains, one of which provides the ...

   pfam08699
   Location:174 → 224

   ArgoL1; Argonaute linker 1 domain

   pfam16486
   Location:34 → 164

   ArgoN; N-terminal domain of argonaute

2. XM_038687562.1 → XP_038543490.1  protein argonaute-1 isoform X3

   UniProtKB/TrEMBL

   A0A8C0QY26

   Conserved Domains (4) summary

   cd02846
   Location:225 → 345

   PAZ_argonaute_like; PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille. ...

   cd04657
   Location:390 → 818

   Piwi_ago-like; PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing complex (RISC) and related complexes. The PIWI domain is the C-terminal portion of Argonaute and consists of two subdomains, one of which provides the ...

   pfam08699
   Location:174 → 224

   ArgoL1; Argonaute linker 1 domain

   pfam16486
   Location:34 → 164

   ArgoN; N-terminal domain of argonaute

3. XM_038687560.1 → XP_038543488.1  protein argonaute-1 isoform X1

   UniProtKB/TrEMBL

   A0A8C0K8V9

   Conserved Domains (4) summary

   cd02846
   Location:233 → 353

   PAZ_argonaute_like; PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille. ...

   cd04657
   Location:398 → 826

   Piwi_ago-like; PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing complex (RISC) and related complexes. The PIWI domain is the C-terminal portion of Argonaute and consists of two subdomains, one of which provides the ...

   pfam08699
   Location:182 → 232

   ArgoL1; Argonaute linker 1 domain

   pfam16486
   Location:98 → 172

   ArgoN; N-terminal domain of argonaute

4. XM_038687561.1 → XP_038543489.1  protein argonaute-1 isoform X2

   UniProtKB/TrEMBL

   A0A8C0K8V9

   Conserved Domains (4) summary

   cd02846
   Location:233 → 353

   PAZ_argonaute_like; PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille. ...

   cd04657
   Location:398 → 823

   Piwi_ago-like; PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing complex (RISC) and related complexes. The PIWI domain is the C-terminal portion of Argonaute and consists of two subdomains, one of which provides the ...

   pfam08699
   Location:182 → 232

   ArgoL1; Argonaute linker 1 domain

   pfam16486
   Location:98 → 172

   ArgoN; N-terminal domain of argonaute

RNA

1. XR_005437904.1 RNA Sequence

Alternate UMICH_Zoey_3.1

Genomic

1. NC_049275.1 Alternate UMICH_Zoey_3.1

   Range

   6247517..6284126 complement

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_038495571.1 → XP_038351499.1  protein argonaute-1 isoform X4

   Conserved Domains (4) summary

   cd02846
   Location:225 → 345

   PAZ_argonaute_like; PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille. ...

   cd04657
   Location:390 → 815

   Piwi_ago-like; PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing complex (RISC) and related complexes. The PIWI domain is the C-terminal portion of Argonaute and consists of two subdomains, one of which provides the ...

   pfam08699
   Location:174 → 224

   ArgoL1; Argonaute linker 1 domain

   pfam16486
   Location:34 → 164

   ArgoN; N-terminal domain of argonaute

2. XM_038495570.1 → XP_038351498.1  protein argonaute-1 isoform X3

   Conserved Domains (4) summary

   cd02846
   Location:225 → 345

   PAZ_argonaute_like; PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille. ...

   cd04657
   Location:390 → 818

   Piwi_ago-like; PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing complex (RISC) and related complexes. The PIWI domain is the C-terminal portion of Argonaute and consists of two subdomains, one of which provides the ...

   pfam08699
   Location:174 → 224

   ArgoL1; Argonaute linker 1 domain

   pfam16486
   Location:34 → 164

   ArgoN; N-terminal domain of argonaute

3. XM_038495568.1 → XP_038351496.1  protein argonaute-1 isoform X1

   Conserved Domains (4) summary

   cd02846
   Location:233 → 353

   PAZ_argonaute_like; PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille. ...

   cd04657
   Location:398 → 826

   Piwi_ago-like; PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing complex (RISC) and related complexes. The PIWI domain is the C-terminal portion of Argonaute and consists of two subdomains, one of which provides the ...

   pfam08699
   Location:182 → 232

   ArgoL1; Argonaute linker 1 domain

   pfam16486
   Location:98 → 172

   ArgoN; N-terminal domain of argonaute

4. XM_038495569.1 → XP_038351497.1  protein argonaute-1 isoform X2

   Conserved Domains (4) summary

   cd02846
   Location:233 → 353

   PAZ_argonaute_like; PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille. ...

   cd04657
   Location:398 → 823

   Piwi_ago-like; PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing complex (RISC) and related complexes. The PIWI domain is the C-terminal portion of Argonaute and consists of two subdomains, one of which provides the ...

   pfam08699
   Location:182 → 232

   ArgoL1; Argonaute linker 1 domain

   pfam16486
   Location:98 → 172

   ArgoN; N-terminal domain of argonaute

RNA

1. XR_005336362.1 RNA Sequence

Alternate UNSW_CanFamBas_1.0

Genomic

1. NC_049756.1 Alternate UNSW_CanFamBas_1.0

   Range

   6321049..6352856 complement

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_038621796.1 → XP_038477724.1  protein argonaute-1 isoform X4

   Conserved Domains (4) summary

   cd02846
   Location:225 → 345

   PAZ_argonaute_like; PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille. ...

   cd04657
   Location:390 → 815

   Piwi_ago-like; PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing complex (RISC) and related complexes. The PIWI domain is the C-terminal portion of Argonaute and consists of two subdomains, one of which provides the ...

   pfam08699
   Location:174 → 224

   ArgoL1; Argonaute linker 1 domain

   pfam16486
   Location:34 → 164

   ArgoN; N-terminal domain of argonaute

2. XM_038621795.1 → XP_038477723.1  protein argonaute-1 isoform X3

   Conserved Domains (4) summary

   cd02846
   Location:225 → 345

   PAZ_argonaute_like; PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille. ...

   cd04657
   Location:390 → 818

   Piwi_ago-like; PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing complex (RISC) and related complexes. The PIWI domain is the C-terminal portion of Argonaute and consists of two subdomains, one of which provides the ...

   pfam08699
   Location:174 → 224

   ArgoL1; Argonaute linker 1 domain

   pfam16486
   Location:34 → 164

   ArgoN; N-terminal domain of argonaute

3. XM_038621793.1 → XP_038477721.1  protein argonaute-1 isoform X1

   Conserved Domains (4) summary

   cd02846
   Location:233 → 353

   PAZ_argonaute_like; PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille. ...

   cd04657
   Location:398 → 826

   Piwi_ago-like; PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing complex (RISC) and related complexes. The PIWI domain is the C-terminal portion of Argonaute and consists of two subdomains, one of which provides the ...

   pfam08699
   Location:182 → 232

   ArgoL1; Argonaute linker 1 domain

   pfam16486
   Location:98 → 172

   ArgoN; N-terminal domain of argonaute

4. XM_038621794.1 → XP_038477722.1  protein argonaute-1 isoform X2

   Conserved Domains (4) summary

   cd02846
   Location:233 → 353

   PAZ_argonaute_like; PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille. ...

   cd04657
   Location:398 → 823

   Piwi_ago-like; PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing complex (RISC) and related complexes. The PIWI domain is the C-terminal portion of Argonaute and consists of two subdomains, one of which provides the ...

   pfam08699
   Location:182 → 232

   ArgoL1; Argonaute linker 1 domain

   pfam16486
   Location:98 → 172

   ArgoN; N-terminal domain of argonaute

RNA

1. XR_005404398.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

1. NC_049236.1 Alternate UU_Cfam_GSD_1.0

   Range

   6330625..6367229 complement

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_038557923.1 → XP_038413851.1  protein argonaute-1 isoform X4

   UniProtKB/TrEMBL

   A0A8C0QY26

   Conserved Domains (4) summary

   cd02846
   Location:225 → 345

   PAZ_argonaute_like; PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille. ...

   cd04657
   Location:390 → 815

   Piwi_ago-like; PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing complex (RISC) and related complexes. The PIWI domain is the C-terminal portion of Argonaute and consists of two subdomains, one of which provides the ...

   pfam08699
   Location:174 → 224

   ArgoL1; Argonaute linker 1 domain

   pfam16486
   Location:34 → 164

   ArgoN; N-terminal domain of argonaute

2. XM_038557922.1 → XP_038413850.1  protein argonaute-1 isoform X3

   UniProtKB/TrEMBL

   A0A8C0QY26

   Conserved Domains (4) summary

   cd02846
   Location:225 → 345

   PAZ_argonaute_like; PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille. ...

   cd04657
   Location:390 → 818

   Piwi_ago-like; PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing complex (RISC) and related complexes. The PIWI domain is the C-terminal portion of Argonaute and consists of two subdomains, one of which provides the ...

   pfam08699
   Location:174 → 224

   ArgoL1; Argonaute linker 1 domain

   pfam16486
   Location:34 → 164

   ArgoN; N-terminal domain of argonaute

3. XM_038557920.1 → XP_038413848.1  protein argonaute-1 isoform X1

   UniProtKB/TrEMBL

   A0A8C0K8V9

   Conserved Domains (4) summary

   cd02846
   Location:233 → 353

   PAZ_argonaute_like; PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille. ...

   cd04657
   Location:398 → 826

   Piwi_ago-like; PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing complex (RISC) and related complexes. The PIWI domain is the C-terminal portion of Argonaute and consists of two subdomains, one of which provides the ...

   pfam08699
   Location:182 → 232

   ArgoL1; Argonaute linker 1 domain

   pfam16486
   Location:98 → 172

   ArgoN; N-terminal domain of argonaute

4. XM_038557921.1 → XP_038413849.1  protein argonaute-1 isoform X2

   UniProtKB/TrEMBL

   A0A8C0K8V9

   Conserved Domains (4) summary

   cd02846
   Location:233 → 353

   PAZ_argonaute_like; PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille. ...

   cd04657
   Location:398 → 823

   Piwi_ago-like; PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing complex (RISC) and related complexes. The PIWI domain is the C-terminal portion of Argonaute and consists of two subdomains, one of which provides the ...

   pfam08699
   Location:182 → 232

   ArgoL1; Argonaute linker 1 domain

   pfam16486
   Location:98 → 172

   ArgoN; N-terminal domain of argonaute

RNA

1. XR_005370173.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

1. NC_006597.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

   Range

   6501590..6538192 complement

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_532563.7 → XP_532563.3  protein argonaute-1 isoform X4

   See identical proteins and their annotated locations for XP_532563.3

   UniProtKB/TrEMBL

   A0A8C0QY26

   Conserved Domains (4) summary

   cd02846
   Location:225 → 345

   PAZ_argonaute_like; PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille. ...

   cd04657
   Location:390 → 815

   Piwi_ago-like; PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing complex (RISC) and related complexes. The PIWI domain is the C-terminal portion of Argonaute and consists of two subdomains, one of which provides the ...

   pfam08699
   Location:174 → 224

   ArgoL1; Argonaute linker 1 domain

   pfam16486
   Location:34 → 164

   ArgoN; N-terminal domain of argonaute

2. XM_014119391.3 → XP_013974866.1  protein argonaute-1 isoform X3

   UniProtKB/TrEMBL

   A0A8C0QY26

   Conserved Domains (4) summary

   cd02846
   Location:225 → 345

   PAZ_argonaute_like; PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille. ...

   cd04657
   Location:390 → 818

   Piwi_ago-like; PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing complex (RISC) and related complexes. The PIWI domain is the C-terminal portion of Argonaute and consists of two subdomains, one of which provides the ...

   pfam08699
   Location:174 → 224

   ArgoL1; Argonaute linker 1 domain

   pfam16486
   Location:34 → 164

   ArgoN; N-terminal domain of argonaute

3. XM_022427851.2 → XP_022283559.1  protein argonaute-1 isoform X1

   UniProtKB/TrEMBL

   A0A8C0K8V9

   Conserved Domains (4) summary

   cd02846
   Location:233 → 353

   PAZ_argonaute_like; PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille. ...

   cd04657
   Location:398 → 826

   Piwi_ago-like; PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing complex (RISC) and related complexes. The PIWI domain is the C-terminal portion of Argonaute and consists of two subdomains, one of which provides the ...

   pfam08699
   Location:182 → 232

   ArgoL1; Argonaute linker 1 domain

   pfam16486
   Location:98 → 172

   ArgoN; N-terminal domain of argonaute

4. XM_022427852.2 → XP_022283560.1  protein argonaute-1 isoform X2

   UniProtKB/TrEMBL

   A0A8C0K8V9

   Conserved Domains (4) summary

   cd02846
   Location:233 → 353

   PAZ_argonaute_like; PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille. ...

   cd04657
   Location:398 → 823

   Piwi_ago-like; PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing complex (RISC) and related complexes. The PIWI domain is the C-terminal portion of Argonaute and consists of two subdomains, one of which provides the ...

   pfam08699
   Location:182 → 232

   ArgoL1; Argonaute linker 1 domain

   pfam16486
   Location:98 → 172

   ArgoN; N-terminal domain of argonaute

RNA

1. XR_002633369.2 RNA Sequence