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    IRF8 interferon regulatory factor 8 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 454294, updated on 17-Aug-2024

    Summary

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    Official Symbol
    IRF8provided by VGNC
    Official Full Name
    interferon regulatory factor 8provided by VGNC
    Primary source
    VGNC:VGNC:5813
    Locus tag
    CK820_G0029452
    See related
    Ensembl:ENSPTRG00000008435
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 18
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 18 NC_072416.2 (84068911..84093393)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 16 NC_072414.1 (84069435..84093296)

    Chromosome 18 - NC_072416.2Genomic Context describing neighboring genes Neighboring gene large ribosomal subunit protein uL1-like Neighboring gene cytochrome c oxidase subunit 4I1 Neighboring gene uncharacterized LOC741428 Neighboring gene uncharacterized LOC741478 Neighboring gene uncharacterized LOC107968921

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in immune system process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    interferon regulatory factor 8

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072416.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      84068911..84093393
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016930314.4 → XP_016785803.1  interferon regulatory factor 8 isoform X1

      UniProtKB/TrEMBL
      A0A2J8LF07, A0A6D2XM83, H2QBN6
      Conserved Domains (2) summary
      pfam00605
      Location:9 → 113
      IRF; Interferon regulatory factor transcription factor
      pfam10401
      Location:203 → 381
      IRF-3; Interferon-regulatory factor 3

    2. XM_063797902.1 → XP_063653972.1  interferon regulatory factor 8 isoform X2

      UniProtKB/TrEMBL
      A0A2J8LEZ4, A0A2J8LF03

    3. XM_016930315.3 → XP_016785804.1  interferon regulatory factor 8 isoform X1

      UniProtKB/TrEMBL
      A0A2J8LF07, A0A6D2XM83, H2QBN6
      Related
      ENSPTRP00000086184.1
      Conserved Domains (2) summary
      pfam00605
      Location:9 → 113
      IRF; Interferon regulatory factor transcription factor
      pfam10401
      Location:203 → 381
      IRF-3; Interferon-regulatory factor 3

    4. XM_016930316.4 → XP_016785805.1  interferon regulatory factor 8 isoform X1

      UniProtKB/TrEMBL
      A0A2J8LF07, A0A6D2XM83, H2QBN6
      Related
      ENSPTRP00000014387.3
      Conserved Domains (2) summary
      pfam00605
      Location:9 → 113
      IRF; Interferon regulatory factor transcription factor
      pfam10401
      Location:203 → 381
      IRF-3; Interferon-regulatory factor 3
    Nucleotide Protein
    Heading Accession and Version

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