U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LAMA3 laminin subunit alpha 3 [ Gallus gallus (chicken) ]

    Gene ID: 428524, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Symbol
    LAMA3provided by CGNC
    Full Name
    laminin subunit alpha 3provided by CGNC
    Primary source
    CGNC:11197
    See related
    Ensembl:ENSGALG00010004966
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LAMA3 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    78
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (102738404..102851911)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (102802988..102916208)

    Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121110075 Neighboring gene NPC intracellular cholesterol transporter 1 Neighboring gene ankyrin repeat domain 29 Neighboring gene uncharacterized LOC121110076 Neighboring gene tetratricopeptide repeat domain 39C Neighboring gene calcium binding tyrosine phosphorylation regulated

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables signaling receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of embryonic development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in basement membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    laminin subunit alpha-3; LOW QUALITY PROTEIN: laminin subunit alpha-3
    Names
    laminin, alpha 3

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      102738404..102851911
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015277980.4 → XP_015133466.3  LOW QUALITY PROTEIN: laminin subunit alpha-3 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XLB7
      Related
      ENSGALP00010006599.1, ENSGALT00010011785.1
      Conserved Domains (8) summary
      smart00136
      Location:44 → 292
      LamNT; Laminin N-terminal domain (domain VI)
      smart00180
      Location:593 → 635
      EGF_Lam; Laminin-type epidermal growth factor-like domai
      cd00055
      Location:1377 → 1420
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      cd00110
      Location:3101 → 3248
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      TIGR02168
      Location:2146 → 2484
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam06008
      Location:1961 → 2218
      Laminin_I; Laminin Domain I
      pfam06009
      Location:2401 → 2529
      Laminin_II; Laminin Domain II
      cl02548
      Location:1625 → 1751
      Laminin_B; Laminin B (Domain IV)

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      102802988..102916208
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040665619.2 → XP_040521553.1  laminin subunit alpha-3 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XLB7
      Conserved Domains (8) summary
      smart00136
      Location:44 → 292
      LamNT; Laminin N-terminal domain (domain VI)
      smart00180
      Location:593 → 635
      EGF_Lam; Laminin-type epidermal growth factor-like domai
      COG5283
      Location:2096 → 2375
      COG5283; Phage-related tail protein [Mobilome: prophages, transposons]
      cd00055
      Location:1379 → 1422
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      cd00110
      Location:3103 → 3250
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      pfam06008
      Location:1963 → 2220
      Laminin_I; Laminin Domain I
      pfam06009
      Location:2403 → 2531
      Laminin_II; Laminin Domain II
      cl02548
      Location:1627 → 1753
      Laminin_B; Laminin B (Domain IV)

    2. XM_040665621.2 → XP_040521555.1  laminin subunit alpha-3 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XLB7
      Conserved Domains (8) summary
      smart00136
      Location:44 → 292
      LamNT; Laminin N-terminal domain (domain VI)
      smart00180
      Location:593 → 635
      EGF_Lam; Laminin-type epidermal growth factor-like domai
      cd00055
      Location:1377 → 1420
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      cd00110
      Location:3101 → 3248
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      TIGR02168
      Location:2146 → 2484
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam06008
      Location:1961 → 2218
      Laminin_I; Laminin Domain I
      pfam06009
      Location:2401 → 2529
      Laminin_II; Laminin Domain II
      cl02548
      Location:1625 → 1751
      Laminin_B; Laminin B (Domain IV)

    3. XM_040665620.2 → XP_040521554.1  laminin subunit alpha-3 isoform X3

      UniProtKB/TrEMBL
      A0A8V0XLB7
      Conserved Domains (8) summary
      smart00136
      Location:44 → 292
      LamNT; Laminin N-terminal domain (domain VI)
      smart00180
      Location:592 → 634
      EGF_Lam; Laminin-type epidermal growth factor-like domai
      COG5283
      Location:2095 → 2374
      COG5283; Phage-related tail protein [Mobilome: prophages, transposons]
      cd00055
      Location:1378 → 1421
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      cd00110
      Location:3102 → 3249
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      pfam06008
      Location:1962 → 2219
      Laminin_I; Laminin Domain I
      pfam06009
      Location:2402 → 2530
      Laminin_II; Laminin Domain II
      cl02548
      Location:1626 → 1752
      Laminin_B; Laminin B (Domain IV)

    4. XM_040665622.1 → XP_040521556.1  laminin subunit alpha-3 isoform X4

      UniProtKB/TrEMBL
      A0A8V0XLB7
      Conserved Domains (8) summary
      smart00136
      Location:45 → 244
      LamNT; Laminin N-terminal domain (domain VI)
      smart00180
      Location:545 → 587
      EGF_Lam; Laminin-type epidermal growth factor-like domai
      cd00055
      Location:1331 → 1374
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      cd00110
      Location:3055 → 3202
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      TIGR02168
      Location:2100 → 2438
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam06008
      Location:1915 → 2172
      Laminin_I; Laminin Domain I
      pfam06009
      Location:2355 → 2483
      Laminin_II; Laminin Domain II
      cl02548
      Location:1579 → 1705
      Laminin_B; Laminin B (Domain IV)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials