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    Arrb1 arrestin, beta 1 [ Mus musculus (house mouse) ]

    Gene ID: 109689, updated on 2-Nov-2024

    Summary

    Official Symbol
    Arrb1provided by MGI
    Official Full Name
    arrestin, beta 1provided by MGI
    Primary source
    MGI:MGI:99473
    See related
    Ensembl:ENSMUSG00000018909 AllianceGenome:MGI:99473
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1200006I17Rik; G430100A01Rik
    Summary
    Enables cysteine-type endopeptidase inhibitor activity involved in apoptotic process and mitogen-activated protein kinase kinase binding activity. Involved in several processes, including negative regulation of Notch signaling pathway; positive regulation of cell communication; and regulation of protein metabolic process. Acts upstream of or within phototransduction and regulation of G protein-coupled receptor signaling pathway. Located in cytosol and pseudopodium. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; liver; and respiratory system. Orthologous to human ARRB1 (arrestin beta 1). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in liver E14.5 (RPKM 46.5), liver E14 (RPKM 43.8) and 27 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Arrb1 in Genome Data Viewer
    Location:
    7 E1; 7 54.09 cM
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (99184356..99255979)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (99535147..99606772)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 39056 Neighboring gene STARR-seq mESC enhancer starr_19659 Neighboring gene predicted gene, 40450 Neighboring gene predicted gene, 34172 Neighboring gene microRNA 326 Neighboring gene trophoblast glycoprotein-like Neighboring gene predicted gene, 53384

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (4) 
    • Targeted (6)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC124269, MGC124270

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables AP-2 adaptor complex binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables G protein-coupled receptor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables GTPase activator activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables V2 vasopressin receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables alpha-1A adrenergic receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables alpha-1B adrenergic receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables angiotensin receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables arrestin family protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables clathrin adaptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables clathrin binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables cysteine-type endopeptidase inhibitor activity involved in apoptotic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables enzyme binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables follicle-stimulating hormone receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables insulin-like growth factor receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables mitogen-activated protein kinase kinase binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables nuclear estrogen receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables phosphoprotein binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein phosphorylated amino acid binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables signaling receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables transcription coactivator activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables transmembrane transporter binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables ubiquitin protein ligase binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor internalization IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in G protein-coupled receptor internalization ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in G protein-coupled receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in endocytosis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in follicle-stimulating hormone signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of ERK1 and ERK2 cascade ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of NF-kappaB transcription factor activity ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of Notch signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in negative regulation of Notch signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in negative regulation of Notch signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of Notch signaling pathway ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in negative regulation of apoptotic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of cysteine-type endopeptidase activity involved in apoptotic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in negative regulation of interleukin-6 production ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of interleukin-8 production ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of neuron apoptotic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of protein phosphorylation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of protein ubiquitination ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within phototransduction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of ERK1 and ERK2 cascade IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of ERK1 and ERK2 cascade IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of ERK1 and ERK2 cascade ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of MAPK cascade ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of Rho protein signal transduction ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of cell population proliferation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of insulin secretion involved in cellular response to glucose stimulus IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of peptidyl-serine phosphorylation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of protein binding IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of protein phosphorylation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of protein phosphorylation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of protein ubiquitination ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of receptor internalization ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of receptor internalization ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of smooth muscle cell apoptotic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of transcription by RNA polymerase II ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in protein transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in protein ubiquitination ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of DNA-templated transcription ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within regulation of G protein-coupled receptor signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of G protein-coupled receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of apoptotic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of transcription by RNA polymerase II ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in stress fiber assembly ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in ubiquitin-dependent protein catabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in ubiquitin-dependent protein catabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in ubiquitin-dependent protein catabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in visual perception IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in basolateral plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in chromatin ISO
    Inferred from Sequence Orthology
    more info
     
    located_in clathrin-coated pit IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in cytoplasmic vesicle IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasmic vesicle IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoplasmic vesicle ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytosol TAS
    Traceable Author Statement
    more info
     
    located_in dendritic spine ISO
    Inferred from Sequence Orthology
    more info
     
    located_in endosome ISO
    Inferred from Sequence Orthology
    more info
     
    located_in intracellular anatomical structure IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nuclear body ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in postsynaptic membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in pseudopodium IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    beta-arrestin-1
    Names
    beta-arrestin1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_177231.2NP_796205.1  beta-arrestin-1 isoform A

      See identical proteins and their annotated locations for NP_796205.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (a) represents the longer transcript and encodes the longer protein (isoform A).
      Source sequence(s)
      AK147508, AK147566
      Consensus CDS
      CCDS40032.1
      UniProtKB/Swiss-Prot
      Q3UH95, Q8BTJ5, Q8BWG8
      UniProtKB/TrEMBL
      J3QNU6
      Related
      ENSMUSP00000095866.3, ENSMUST00000098266.9
      Conserved Domains (2) summary
      smart01017
      Location:193356
      Arrestin_C; Arrestin (or S-antigen), C-terminal domain
      pfam00339
      Location:18174
      Arrestin_N; Arrestin (or S-antigen), N-terminal domain
    2. NM_178220.3NP_835738.1  beta-arrestin-1 isoform B

      See identical proteins and their annotated locations for NP_835738.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (b) lacks an alternate exon in the 3' coding region compared to variant a. The resulting protein (isoform B) is shorter but has the same N- and C-termini compared to isoform A.
      Source sequence(s)
      AK090090, AK147508, AK147566
      Consensus CDS
      CCDS21484.1
      UniProtKB/TrEMBL
      J3QNU6
      Related
      ENSMUSP00000032995.9, ENSMUST00000032995.15
      Conserved Domains (2) summary
      smart01017
      Location:193348
      Arrestin_C; Arrestin (or S-antigen), C-terminal domain
      pfam00339
      Location:18174
      Arrestin_N; Arrestin (or S-antigen), N-terminal domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      99184356..99255979
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006507198.5XP_006507261.1  beta-arrestin-1 isoform X1

      UniProtKB/TrEMBL
      J3QNU6
      Conserved Domains (2) summary
      smart01017
      Location:230393
      Arrestin_C; Arrestin (or S-antigen), C-terminal domain
      pfam00339
      Location:55211
      Arrestin_N; Arrestin (or S-antigen), N-terminal domain
    2. XM_006507199.5XP_006507262.1  beta-arrestin-1 isoform X2

      UniProtKB/TrEMBL
      J3QNU6
      Conserved Domains (2) summary
      smart01017
      Location:230385
      Arrestin_C; Arrestin (or S-antigen), C-terminal domain
      pfam00339
      Location:55211
      Arrestin_N; Arrestin (or S-antigen), N-terminal domain
    3. XM_006507200.3XP_006507263.1  beta-arrestin-1 isoform X5

      UniProtKB/TrEMBL
      J3QNU6
      Conserved Domains (2) summary
      smart01017
      Location:188351
      Arrestin_C; Arrestin (or S-antigen), C-terminal domain
      pfam00339
      Location:13169
      Arrestin_N; Arrestin (or S-antigen), N-terminal domain
    4. XM_036152569.1XP_036008462.1  beta-arrestin-1 isoform X4

      UniProtKB/TrEMBL
      J3QNU6
      Conserved Domains (2) summary
      smart01017
      Location:188343
      Arrestin_C; Arrestin (or S-antigen), C-terminal domain
      pfam00339
      Location:13169
      Arrestin_N; Arrestin (or S-antigen), N-terminal domain
    5. XM_011241644.3XP_011239946.1  beta-arrestin-1 isoform X3

      UniProtKB/TrEMBL
      J3QNU6
      Conserved Domains (2) summary
      smart01017
      Location:205368
      Arrestin_C; Arrestin (or S-antigen), C-terminal domain
      pfam00339
      Location:30186
      Arrestin_N; Arrestin (or S-antigen), N-terminal domain

    RNA

    1. XR_003946373.2 RNA Sequence

    2. XR_378207.5 RNA Sequence

    3. XR_378208.5 RNA Sequence

    4. XR_003946374.1 RNA Sequence

    5. XR_003946372.2 RNA Sequence