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    LOC120063024 2-oxoglutarate dehydrogenase, mitochondrial [ Salvelinus namaycush (lake trout) ]

    Gene ID: 120063024, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC120063024
    Gene description
    2-oxoglutarate dehydrogenase, mitochondrial
    See related
    EnsemblRapid:ENSSNMG00000007767
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Salvelinus namaycush
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
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    Genomic context

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    See LOC120063024 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    100 current SaNama_1.0 (GCF_016432855.1) 18 NC_052324.1 (3166796..3262773, complement)

    Chromosome 18 - NC_052324.1Genomic Context describing neighboring genes Neighboring gene inactive phospholipid phosphatase 7-like Neighboring gene bromodomain-containing protein 3-like Neighboring gene spindlin-Z-like Neighboring gene peptidyl-prolyl cis-trans isomerase C-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_052324.1 Chromosome 18 Reference SaNama_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables oxoglutarate dehydrogenase (succinyl-transferring) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables thiamine pyrophosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tricarboxylic acid cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of oxoglutarate dehydrogenase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    2-oxoglutarate dehydrogenase, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Salvelinus namaycush Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SaNama_1.0 Primary Assembly

    Genomic

    1. NC_052324.1 Reference SaNama_1.0 Primary Assembly

      Range
      3166796..3262773 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039013124.1 → XP_038869052.1  2-oxoglutarate dehydrogenase, mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A8U1F3F9
      Conserved Domains (1) summary
      PRK09404
      Location:47 → 1007
      sucA; 2-oxoglutarate dehydrogenase E1 component; Reviewed

    2. XM_039013123.1 → XP_038869051.1  2-oxoglutarate dehydrogenase, mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A8U1F3F9
      Related
      ENSSNMP00000010882.1, ENSSNMT00000012150.1
      Conserved Domains (1) summary
      PRK09404
      Location:47 → 1007
      sucA; 2-oxoglutarate dehydrogenase E1 component; Reviewed

    3. XM_039013125.1 → XP_038869053.1  2-oxoglutarate dehydrogenase, mitochondrial isoform X2

      UniProtKB/TrEMBL
      A0A8U1F3U4
      Related
      ENSSNMP00000010901.1, ENSSNMT00000012169.1
      Conserved Domains (1) summary
      PRK09404
      Location:47 → 1004
      sucA; 2-oxoglutarate dehydrogenase E1 component; Reviewed

    4. XM_039013127.1 → XP_038869055.1  2-oxoglutarate dehydrogenase, mitochondrial isoform X3

      UniProtKB/TrEMBL
      A0A8U1H4U7
      Related
      ENSSNMP00000010824.1, ENSSNMT00000012088.1
      Conserved Domains (1) summary
      PRK09404
      Location:3 → 803
      sucA; 2-oxoglutarate dehydrogenase E1 component; Reviewed
    Nucleotide Protein
    Heading Accession and Version

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