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    CELSR3 cadherin EGF LAG seven-pass G-type receptor 3 [ Egretta garzetta (little egret) ]

    Gene ID: 104126641, updated on 12-Mar-2024

    Summary

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    Gene symbol
    CELSR3
    Gene description
    cadherin EGF LAG seven-pass G-type receptor 3
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Egretta garzetta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Pelecaniformes; Ardeidae; Egretta
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    human mouse all
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    Genomic context

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    See CELSR3 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    36
    Annotation release Status Assembly Chr Location
    101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009259719.1 (2531386..2566201, complement)

    NW_009259719.1Genomic Context describing neighboring genes Neighboring gene cytochrome b-c1 complex subunit 1, mitochondrial Neighboring gene solute carrier family 26 member 6 Neighboring gene NCK interacting protein with SH3 domain Neighboring gene inositol hexakisphosphate kinase 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_009259719 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell surface receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type receptor 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM68718v1 Primary Assembly

    Genomic

    1. NW_009259719.1 Reference ASM68718v1 Primary Assembly

      Range
      2531386..2566201 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035894821.1 → XP_035750714.1  LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type receptor 3

      Conserved Domains (10) summary
      smart00303
      Location:2014 → 2065
      GPS; G-protein-coupled receptor proteolytic site domain
      cd11304
      Location:199 → 296
      Cadherin_repeat; Cadherin tandem repeat domain
      smart00008
      Location:1660 → 1726
      HormR; Domain present in hormone receptors
      smart00112
      Location:4 → 87
      CA; Cadherin repeats
      smart00180
      Location:1611 → 1656
      EGF_Lam; Laminin-type epidermal growth factor-like domai
      cd00054
      Location:1484 → 1516
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      cd00110
      Location:1054 → 1237
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      cd15993
      Location:2074 → 2327
      7tmB2_CELSR3; Cadherin EGF LAG seven-pass G-type receptor 3, member of the class B2 family of seven-transmembrane G protein-coupled receptors
      pfam00008
      Location:1263 → 1293
      EGF; EGF-like domain
      pfam16489
      Location:1743 → 1988
      GAIN; GPCR-Autoproteolysis INducing (GAIN) domain
    Nucleotide Protein
    Heading Accession and Version

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