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    LYPD6B LY6/PLAUR domain containing 6B [ Nomascus leucogenys (northern white-cheeked gibbon) ]

    Gene ID: 100591389, updated on 8-Mar-2024

    Summary

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    Gene symbol
    LYPD6B
    Gene description
    LY6/PLAUR domain containing 6B
    See related
    EnsemblRapid:ENSNLEG00000031677
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nomascus leucogenys
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
    Orthologs
    human mouse all
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    Genomic context

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    See LYPD6B in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Asia_NLE_v1 (GCF_006542625.1) 20 NC_044400.1 (2925865..3102119, complement)
    102 previous assembly Nleu_3.0 (GCF_000146795.2) 20 NC_019835.1 (2805996..2981582, complement)

    Chromosome 20 - NC_044400.1Genomic Context describing neighboring genes Neighboring gene LY6/PLAUR domain containing 6 Neighboring gene U2 spliceosomal RNA Neighboring gene protein FAM8A1 pseudogene Neighboring gene thioredoxin pseudogene Neighboring gene kinesin family member 5C Neighboring gene uncharacterized LOC115831883 Neighboring gene 40S ribosomal protein S20 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables acetylcholine receptor regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ly6/PLAUR domain-containing protein 6B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Asia_NLE_v1 Primary Assembly

    Genomic

    1. NC_044400.1 Reference Asia_NLE_v1 Primary Assembly

      Range
      2925865..3102119 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012502551.2 → XP_012358005.2  ly6/PLAUR domain-containing protein 6B isoform X1

      UniProtKB/TrEMBL
      A0A2I3GD49
      Conserved Domains (1) summary
      pfam16975
      Location:40 → 144
      UPAR_LY6_2; Ly6/PLAUR domain-containing protein 6, Lypd6

    2. XM_012502552.2 → XP_012358006.2  ly6/PLAUR domain-containing protein 6B isoform X4

      UniProtKB/TrEMBL
      A0A2I3GD49
      Related
      ENSNLEP00000025667.2, ENSNLET00000036476.2

    3. XM_030801329.1 → XP_030657189.1  ly6/PLAUR domain-containing protein 6B isoform X2

      UniProtKB/TrEMBL
      A0A2I3GD49
      Conserved Domains (1) summary
      pfam16975
      Location:74 → 178
      UPAR_LY6_2; Ly6/PLAUR domain-containing protein 6, Lypd6

    4. XM_030801331.1 → XP_030657191.1  ly6/PLAUR domain-containing protein 6B isoform X4

      UniProtKB/TrEMBL
      A0A2I3GD49
      Conserved Domains (1) summary
      pfam16975
      Location:54 → 158
      UPAR_LY6_2; Ly6/PLAUR domain-containing protein 6, Lypd6

    5. XM_030801328.1 → XP_030657188.1  ly6/PLAUR domain-containing protein 6B isoform X2

      UniProtKB/TrEMBL
      A0A2I3GD49

    6. XM_030801332.1 → XP_030657192.1  ly6/PLAUR domain-containing protein 6B isoform X1

      UniProtKB/TrEMBL
      A0A2I3GD49
      Conserved Domains (1) summary
      pfam16975
      Location:40 → 144
      UPAR_LY6_2; Ly6/PLAUR domain-containing protein 6, Lypd6

    7. XM_030801330.1 → XP_030657190.1  ly6/PLAUR domain-containing protein 6B isoform X3

      UniProtKB/TrEMBL
      A0A2I3GD49
      Related
      ENSNLEP00000059747.1, ENSNLET00000065896.1
      Conserved Domains (1) summary
      pfam16975
      Location:63 → 167
      UPAR_LY6_2; Ly6/PLAUR domain-containing protein 6, Lypd6

    8. XM_030801327.1 → XP_030657187.1  ly6/PLAUR domain-containing protein 6B isoform X1

      UniProtKB/TrEMBL
      A0A2I3GD49
      Related
      ENSNLEP00000029219.2, ENSNLET00000053062.2
      Conserved Domains (1) summary
      pfam16975
      Location:40 → 144
      UPAR_LY6_2; Ly6/PLAUR domain-containing protein 6, Lypd6

    9. XM_030801333.1 → XP_030657193.1  ly6/PLAUR domain-containing protein 6B isoform X1

      UniProtKB/TrEMBL
      A0A2I3GD49
      Conserved Domains (1) summary
      pfam16975
      Location:40 → 144
      UPAR_LY6_2; Ly6/PLAUR domain-containing protein 6, Lypd6
    Nucleotide Protein
    Heading Accession and Version

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