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    Hcs holocarboxylase synthetase-like protein [ Ostrinia furnacalis (Asian corn borer) ]

    Gene ID: 114359388, updated on 18-Sep-2024

    Summary

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    Gene symbol
    Hcs
    Gene description
    holocarboxylase synthetase-like protein
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ostrinia furnacalis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Pyraloidea; Crambidae; Pyraustinae; Ostrinia
    Orthologs
    fruit fly all
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    Genomic context

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    See Hcs in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    100 current ASM419383v1 (GCF_004193835.1) Unplaced Scaffold NW_021134601.1 (26808..45498, complement)

    NW_021134601.1Genomic Context describing neighboring genes Neighboring gene SWI/SNF complex subunit SMARCC2-like Neighboring gene regucalcin-like Neighboring gene microtubule-associated proteins 1A/1B light chain 3B-like Neighboring gene mediator complex subunit intersex

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_021134601 Unplaced Scaffold Reference ASM419383v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables biotin--[biotin carboxyl-carrier protein] ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein modification process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: biotin--protein ligase
    Names
    biotin--protein ligase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ostrinia furnacalis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM419383v1 Primary Assembly

    Genomic

    1. NW_021134601.1 Reference ASM419383v1 Primary Assembly

      Range
      26808..45498 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028313773.1 → XP_028169574.1  LOW QUALITY PROTEIN: biotin--protein ligase

      Conserved Domains (1) summary
      COG0340
      Location:736 → 948
      BirA2; Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version

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