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    CHD1L chromodomain helicase DNA binding protein 1 like [ Chaetura pelagica (chimney swift) ]

    Gene ID: 104389288, updated on 3-Aug-2024

    Summary

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    Gene symbol
    CHD1L
    Gene description
    chromodomain helicase DNA binding protein 1 like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Chaetura pelagica
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Strisores; Apodiformes; Apodidae; Apodinae; Chaetura
    Orthologs
    human mouse all
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    Genomic context

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    See CHD1L in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    100 current ChaPel_1.0 (GCF_000747805.1) Unplaced Scaffold NW_009953386.1 (675741..698608, complement)

    NW_009953386.1Genomic Context describing neighboring genes Neighboring gene eukaryotic initiation factor 4A-III-like Neighboring gene VANGL planar cell polarity protein 1 Neighboring gene fatty acid amide hydrolase-like Neighboring gene transmembrane protein 39A

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_009953386.1 Unplaced Scaffold Reference ChaPel_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP-dependent chromatin remodeler activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chromatin remodeling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    chromodomain-helicase-DNA-binding protein 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Chaetura pelagica Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ChaPel_1.0

    Genomic

    1. NW_009953386.1 Reference ChaPel_1.0

      Range
      675741..698608 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009998257.1 → XP_009996559.1  chromodomain-helicase-DNA-binding protein 1-like

      Conserved Domains (4) summary
      cd00046
      Location:33 → 173
      DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
      cd00079
      Location:310 → 398
      HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
      cd03331
      Location:647 → 797
      Macro_Poa1p_like_SNF2; Macro domain, Poa1p_like family, SNF2 subfamily. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ...
      pfam00176
      Location:17 → 296
      SNF2_N; SNF2 family N-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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