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    C1H18orf54 chromosome 1 C18orf54 homolog [ Canis lupus familiaris (dog) ]

    Gene ID: 476192, updated on 17-Aug-2024

    Summary

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    Official Symbol
    C1H18orf54provided by VGNC
    Official Full Name
    chromosome 1 C18orf54 homologprovided by VGNC
    Primary source
    VGNC:VGNC:52506
    See related
    Ensembl:ENSCAFG00845002731
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See C1H18orf54 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 1 NC_051805.1 (20990171..21016205, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 1 NC_006583.4 (22088208..22114246, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 1 NC_049222.1 (21210308..21236342, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 1 NC_049261.1 (21046278..21072518, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 1 NC_049742.1 (20938706..20964747, complement)

    Chromosome 1 - NC_051805.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111095182 Neighboring gene cupin superfamily member 1 Neighboring gene thymosin beta-4 Neighboring gene StAR related lipid transfer domain containing 6 Neighboring gene DNA polymerase iota

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    lung adenoma susceptibility protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051805.1 Reference ROS_Cfam_1.0

      Range
      20990171..21016205 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038654086.1 → XP_038510014.1  lung adenoma susceptibility protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8C0SAI6, A0A8I3MU92, A0A8P0NXW0
      Related
      ENSCAFP00845003916.1, ENSCAFT00845004902.1
      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    2. XM_038654084.1 → XP_038510012.1  lung adenoma susceptibility protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C0YVB9, A0A8I3MU86
      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    3. XM_038654081.1 → XP_038510009.1  lung adenoma susceptibility protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C0YVB9, A0A8I3MU86
      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    4. XM_038654082.1 → XP_038510010.1  lung adenoma susceptibility protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C0YVB9, A0A8I3MU86
      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    5. XM_038654083.1 → XP_038510011.1  lung adenoma susceptibility protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C0YVB9, A0A8I3MU86
      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    6. XM_038654085.1 → XP_038510013.1  lung adenoma susceptibility protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C0YVB9, A0A8I3MU86
      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    7. XM_038654087.1 → XP_038510015.1  lung adenoma susceptibility protein 2 isoform X3

      UniProtKB/TrEMBL
      A0A8C0YVB9, A0A8I3MU86
      Related
      ENSCAFP00845003897.1, ENSCAFT00845004873.1
      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    8. XM_038654088.1 → XP_038510016.1  lung adenoma susceptibility protein 2 isoform X4

      UniProtKB/TrEMBL
      A0A8I3MU92, A0A8P0NXW0
      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    RNA

    1. XR_005421001.1 RNA Sequence

    2. XR_005421003.1 RNA Sequence

    3. XR_005421002.1 RNA Sequence

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049261.1 Alternate UMICH_Zoey_3.1

      Range
      21046278..21072518 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038465351.1 → XP_038321279.1  lung adenoma susceptibility protein 2 isoform X2

      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    2. XM_038465349.1 → XP_038321277.1  lung adenoma susceptibility protein 2 isoform X1

      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    3. XM_038465346.1 → XP_038321274.1  lung adenoma susceptibility protein 2 isoform X1

      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    4. XM_038465347.1 → XP_038321275.1  lung adenoma susceptibility protein 2 isoform X1

      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    5. XM_038465348.1 → XP_038321276.1  lung adenoma susceptibility protein 2 isoform X1

      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    6. XM_038465350.1 → XP_038321278.1  lung adenoma susceptibility protein 2 isoform X1

      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    7. XM_038465352.1 → XP_038321280.1  lung adenoma susceptibility protein 2 isoform X3

      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    8. XM_038465353.1 → XP_038321281.1  lung adenoma susceptibility protein 2 isoform X4

      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    RNA

    1. XR_005319805.1 RNA Sequence

    2. XR_005319807.1 RNA Sequence

    3. XR_005319806.1 RNA Sequence

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049742.1 Alternate UNSW_CanFamBas_1.0

      Range
      20938706..20964747 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038590265.1 → XP_038446193.1  lung adenoma susceptibility protein 2 isoform X2

      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    2. XM_038590263.1 → XP_038446191.1  lung adenoma susceptibility protein 2 isoform X1

      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    3. XM_038590260.1 → XP_038446188.1  lung adenoma susceptibility protein 2 isoform X1

      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    4. XM_038590261.1 → XP_038446189.1  lung adenoma susceptibility protein 2 isoform X1

      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    5. XM_038590262.1 → XP_038446190.1  lung adenoma susceptibility protein 2 isoform X1

      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    6. XM_038590264.1 → XP_038446192.1  lung adenoma susceptibility protein 2 isoform X1

      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    7. XM_038590266.1 → XP_038446194.1  lung adenoma susceptibility protein 2 isoform X3

      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    8. XM_038590267.1 → XP_038446195.1  lung adenoma susceptibility protein 2 isoform X4

      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    RNA

    1. XR_005388048.1 RNA Sequence

    2. XR_005388050.1 RNA Sequence

    3. XR_005388049.1 RNA Sequence

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049222.1 Alternate UU_Cfam_GSD_1.0

      Range
      21210308..21236342 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038525954.1 → XP_038381882.1  lung adenoma susceptibility protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8C0SAI6, A0A8I3MU92, A0A8P0NXW0
      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    2. XM_038525952.1 → XP_038381880.1  lung adenoma susceptibility protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C0YVB9, A0A8I3MU86
      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    3. XM_038525949.1 → XP_038381877.1  lung adenoma susceptibility protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C0YVB9, A0A8I3MU86
      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    4. XM_038525950.1 → XP_038381878.1  lung adenoma susceptibility protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C0YVB9, A0A8I3MU86
      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    5. XM_038525951.1 → XP_038381879.1  lung adenoma susceptibility protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C0YVB9, A0A8I3MU86
      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    6. XM_038525953.1 → XP_038381881.1  lung adenoma susceptibility protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C0YVB9, A0A8I3MU86
      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    7. XM_038525955.1 → XP_038381883.1  lung adenoma susceptibility protein 2 isoform X3

      UniProtKB/TrEMBL
      A0A8C0YVB9, A0A8I3MU86
      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    8. XM_038525956.1 → XP_038381884.1  lung adenoma susceptibility protein 2 isoform X4

      UniProtKB/TrEMBL
      A0A8I3MU92, A0A8P0NXW0
      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    RNA

    1. XR_005353466.1 RNA Sequence

    2. XR_005353468.1 RNA Sequence

    3. XR_005353467.1 RNA Sequence

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006583.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      22088208..22114246 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005615386.4 → XP_005615443.1  lung adenoma susceptibility protein 2 isoform X2

      See identical proteins and their annotated locations for XP_005615443.1

      UniProtKB/TrEMBL
      A0A8C0SAI6, A0A8I3MU92, A0A8P0NXW0
      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    2. XM_038484589.1 → XP_038340517.1  lung adenoma susceptibility protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C0YVB9, A0A8I3MU86
      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    3. XM_038484491.1 → XP_038340419.1  lung adenoma susceptibility protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C0YVB9, A0A8I3MU86
      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    4. XM_038484492.1 → XP_038340420.1  lung adenoma susceptibility protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C0YVB9, A0A8I3MU86
      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    5. XM_022416775.2 → XP_022272483.1  lung adenoma susceptibility protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C0YVB9, A0A8I3MU86
      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    6. XM_022416782.2 → XP_022272490.1  lung adenoma susceptibility protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C0YVB9, A0A8I3MU86
      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    7. XM_022416791.2 → XP_022272499.1  lung adenoma susceptibility protein 2 isoform X3

      UniProtKB/TrEMBL
      A0A8C0YVB9, A0A8I3MU86
      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    8. XM_022416796.2 → XP_022272504.1  lung adenoma susceptibility protein 2 isoform X4

      UniProtKB/TrEMBL
      A0A8I3MU92, A0A8P0NXW0
      Conserved Domains (1) summary
      pfam15792
      Location:162 → 236
      LAS2; Lung adenoma susceptibility protein 2

    RNA

    1. XR_002624999.2 RNA Sequence

    2. XR_002625001.2 RNA Sequence

    3. XR_002625000.2 RNA Sequence

    Nucleotide Protein
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