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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_046155.1 RefSeqGene
- Range
-
5035..249852
- Download
- GenBank, FASTA, Sequence Viewer (Graphics), LRG_1071
mRNA and Protein(s)
-
NM_001202550.2 → NP_001189479.1 WD repeat-containing protein 27 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks three alternate exons that result in the loss of an in-frame segment in the 5' coding region, and lacks another alternate exon that results in a frameshift in the 3' coding region, compared to variant 1. The encoded isoform (2) has a distinct C-terminus and is shorter than isoform 1.
- Source sequence(s)
-
AL513547, AW194823, BC131633, DB292377
- Consensus CDS
-
CCDS56459.1
- UniProtKB/Swiss-Prot
- A2RRH5, A5PLM8, C9JGV0, Q5T066
- Related
- ENSP00000397869.1, ENST00000423258.5
- Conserved Domains (3) summary
-
- COG2319
Location:454 → 727
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:419 → 456
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:418 → 727
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_001350623.2 → NP_001337552.1 WD repeat-containing protein 27 isoform 3
Status: REVIEWED
- Source sequence(s)
-
AL031315, AL135910, AL513547
- UniProtKB/Swiss-Prot
- A2RRH5, A5PLM8, C9JGV0, Q5T066
- Conserved Domains (2) summary
-
- sd00039
Location:355 → 392
- 7WD40; WD40 repeat [structural motif]
- cl25539
Location:354 → 663
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_001350624.2 → NP_001337553.1 WD repeat-containing protein 27 isoform 4
Status: REVIEWED
- Description
- Transcript Variant: This variant (4), as well as variant 5, encodes isoform 4.
- Source sequence(s)
-
AL513547
- Consensus CDS
-
CCDS94039.1
- UniProtKB/TrEMBL
-
A0A3B3ITF5
- Related
- ENSP00000497692.1, ENST00000647873.1
- Conserved Domains (2) summary
-
- sd00039
Location:32 → 69
- 7WD40; WD40 repeat [structural motif]
- cl25539
Location:39 → 204
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_001350625.2 → NP_001337554.1 WD repeat-containing protein 27 isoform 4
Status: REVIEWED
- Description
- Transcript Variant: This variant (5), as well as variant 4, encodes isoform 4.
- Source sequence(s)
-
AL513547
- Consensus CDS
-
CCDS94039.1
- UniProtKB/TrEMBL
-
A0A3B3ITF5
- Conserved Domains (2) summary
-
- sd00039
Location:32 → 69
- 7WD40; WD40 repeat [structural motif]
- cl25539
Location:39 → 204
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_182552.5 → NP_872358.4 WD repeat-containing protein 27 isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AL031315, AL513547, BC040606, DB292377
- Consensus CDS
-
CCDS47520.2
- UniProtKB/Swiss-Prot
- A2RRH5, A5PLM8, C9JGV0, Q5T066
- Related
- ENSP00000416289.1, ENST00000448612.6
- Conserved Domains (4) summary
-
- COG2319
Location:544 → 865
- WD40; WD40 repeat [General function prediction only]
- pfam13900
Location:847 → 881
- GVQW; Putative domain of unknown function
- sd00039
Location:546 → 583
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:545 → 842
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
RNA
-
NR_146875.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL031315, AL135910, AL513547
- Related
-
ENST00000648472.1
-
NR_146876.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL513547
- Related
-
ENST00000649303.1
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000006.12 Reference GRCh38.p14 Primary Assembly
- Range
-
169426420..169702029 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011535688.4 → XP_011533990.1 WD repeat-containing protein 27 isoform X6
See identical proteins and their annotated locations for XP_011533990.1
- UniProtKB/Swiss-Prot
- A2RRH5, A5PLM8, C9JGV0, Q5T066
- Conserved Domains (3) summary
-
- COG2319
Location:544 → 838
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:546 → 583
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:545 → 853
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_011535687.4 → XP_011533989.1 WD repeat-containing protein 27 isoform X6
See identical proteins and their annotated locations for XP_011533989.1
- UniProtKB/Swiss-Prot
- A2RRH5, A5PLM8, C9JGV0, Q5T066
- Conserved Domains (3) summary
-
- COG2319
Location:544 → 838
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:546 → 583
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:545 → 853
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_017010669.2 → XP_016866158.1 WD repeat-containing protein 27 isoform X12
- UniProtKB/Swiss-Prot
- A2RRH5, A5PLM8, C9JGV0, Q5T066
- Conserved Domains (2) summary
-
- sd00039
Location:355 → 392
- 7WD40; WD40 repeat [structural motif]
- cl25539
Location:354 → 663
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_017010660.3 → XP_016866149.1 WD repeat-containing protein 27 isoform X5
- UniProtKB/Swiss-Prot
- A2RRH5, A5PLM8, C9JGV0, Q5T066
- Conserved Domains (3) summary
-
- COG2319
Location:581 → 854
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:546 → 583
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:545 → 854
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_011535691.4 → XP_011533993.1 WD repeat-containing protein 27 isoform X7
- UniProtKB/Swiss-Prot
- A2RRH5, A5PLM8, C9JGV0, Q5T066
- Conserved Domains (3) summary
-
- COG2319
Location:544 → 838
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:546 → 583
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:579 → 838
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_047418584.1 → XP_047274540.1 WD repeat-containing protein 27 isoform X3
-
XM_011535692.4 → XP_011533994.1 WD repeat-containing protein 27 isoform X8
- UniProtKB/Swiss-Prot
- A2RRH5, A5PLM8, C9JGV0, Q5T066
- Conserved Domains (3) summary
-
- COG2319
Location:544 → 838
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:546 → 583
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:545 → 842
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_011535685.4 → XP_011533987.1 WD repeat-containing protein 27 isoform X4
- UniProtKB/Swiss-Prot
- A2RRH5, A5PLM8, C9JGV0, Q5T066
- Conserved Domains (3) summary
-
- COG2319
Location:544 → 838
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:546 → 583
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:579 → 838
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_011535682.4 → XP_011533984.1 WD repeat-containing protein 27 isoform X1
- UniProtKB/Swiss-Prot
- A2RRH5, A5PLM8, C9JGV0, Q5T066
- Conserved Domains (3) summary
-
- COG2319
Location:544 → 885
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:546 → 583
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:545 → 842
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_011535684.4 → XP_011533986.1 WD repeat-containing protein 27 isoform X2
- UniProtKB/Swiss-Prot
- A2RRH5, A5PLM8, C9JGV0, Q5T066
- Conserved Domains (3) summary
-
- COG2319
Location:544 → 838
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:546 → 583
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:545 → 842
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_047418586.1 → XP_047274542.1 WD repeat-containing protein 27 isoform X11
-
XM_011535693.4 → XP_011533995.1 WD repeat-containing protein 27 isoform X9
- UniProtKB/Swiss-Prot
- A2RRH5, A5PLM8, C9JGV0, Q5T066
- Conserved Domains (3) summary
-
- COG2319
Location:544 → 750
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:32 → 69
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:48 → 266
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_047418585.1 → XP_047274541.1 WD repeat-containing protein 27 isoform X10
-
XM_047418587.1 → XP_047274543.1 WD repeat-containing protein 27 isoform X13
-
XM_017010672.3 → XP_016866161.1 WD repeat-containing protein 27 isoform X14
-
XM_011535697.4 → XP_011533999.1 WD repeat-containing protein 27 isoform X17
- Conserved Domains (3) summary
-
- COG2319
Location:15 → 356
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:32 → 69
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:48 → 266
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_047418590.1 → XP_047274546.1 WD repeat-containing protein 27 isoform X16
-
XM_047418588.1 → XP_047274544.1 WD repeat-containing protein 27 isoform X15
-
XM_047418589.1 → XP_047274545.1 WD repeat-containing protein 27 isoform X16
RNA
-
XR_007059231.1 RNA Sequence
-
XR_007059230.1 RNA Sequence
-
XR_007059233.1 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060930.1 Alternate T2T-CHM13v2.0
- Range
-
170780064..171055943 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054355043.1 → XP_054211018.1 WD repeat-containing protein 27 isoform X6
-
XM_054355042.1 → XP_054211017.1 WD repeat-containing protein 27 isoform X6
-
XM_054355049.1 → XP_054211024.1 WD repeat-containing protein 27 isoform X12
-
XM_054355041.1 → XP_054211016.1 WD repeat-containing protein 27 isoform X5
-
XM_054355044.1 → XP_054211019.1 WD repeat-containing protein 27 isoform X7
-
XM_054355040.1 → XP_054211015.1 WD repeat-containing protein 27 isoform X3
-
XM_054355045.1 → XP_054211020.1 WD repeat-containing protein 27 isoform X8
-
XM_054355038.1 → XP_054211013.1 WD repeat-containing protein 27 isoform X1
-
XM_054355039.1 → XP_054211014.1 WD repeat-containing protein 27 isoform X2
-
XM_054355048.1 → XP_054211023.1 WD repeat-containing protein 27 isoform X11
-
XM_054355046.1 → XP_054211021.1 WD repeat-containing protein 27 isoform X9
-
XM_054355047.1 → XP_054211022.1 WD repeat-containing protein 27 isoform X10
-
XM_054355050.1 → XP_054211025.1 WD repeat-containing protein 27 isoform X13
-
XM_054355051.1 → XP_054211026.1 WD repeat-containing protein 27 isoform X14
-
XM_054355055.1 → XP_054211030.1 WD repeat-containing protein 27 isoform X17
-
XM_054355054.1 → XP_054211029.1 WD repeat-containing protein 27 isoform X16
-
XM_054355052.1 → XP_054211027.1 WD repeat-containing protein 27 isoform X15
-
XM_054355053.1 → XP_054211028.1 WD repeat-containing protein 27 isoform X16
RNA
-
XR_008487290.1 RNA Sequence
-
XR_008487289.1 RNA Sequence
-
XR_008487291.1 RNA Sequence