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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001271725.1 → NP_001258654.1 tripartite motif-containing protein 2 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
AK147275, CA751006, CJ100776
- Consensus CDS
-
CCDS71257.1
- UniProtKB/TrEMBL
- E9QKC6, Q3URK9
- Related
- ENSMUSP00000049902.5, ENSMUST00000054990.11
- Conserved Domains (7) summary
-
- smart00502
Location:187 → 313
- BBC; B-Box C-terminal domain
- smart00336
Location:139 → 180
- BBOX; B-Box-type zinc finger
- smart00557
Location:351 → 447
- IG_FLMN; Filamin-type immunoglobulin domains
- COG3391
Location:516 → 761
- YncE; DNA-binding beta-propeller fold protein YncE [General function prediction only]
- cd00162
Location:49 → 92
- RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
- cd14960
Location:497 → 770
- NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
- pfam00630
Location:351 → 444
- Filamin; Filamin/ABP280 repeat
-
NM_001271726.1 → NP_001258655.1 tripartite motif-containing protein 2 isoform 2
See identical proteins and their annotated locations for NP_001258655.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) contains a distinct 5' UTR and lacks an in-frame portion of the 5' coding region, compared to variant 1. The resulting isoform (2) has a shorter N-terminus, compared to isoform 1. Variants 2, 3, and 5 encode the same isoform (2).
- Source sequence(s)
-
AC102235, AK147275, CA751006, CD802800
- Consensus CDS
-
CCDS71256.1
- UniProtKB/Swiss-Prot
- Q3UHP5, Q5DU27, Q8C981, Q9ESN6
- UniProtKB/TrEMBL
-
Q3TPI3
- Related
- ENSMUSP00000103320.2, ENSMUST00000107692.8
- Conserved Domains (5) summary
-
- smart00502
Location:161 → 287
- BBC; B-Box C-terminal domain
- smart00557
Location:325 → 421
- IG_FLMN; Filamin-type immunoglobulin domains
- cd14960
Location:471 → 744
- NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
- cd16767
Location:20 → 65
- RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
- cd19824
Location:115 → 156
- Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins
-
NM_001271727.1 → NP_001258656.1 tripartite motif-containing protein 2 isoform 2
See identical proteins and their annotated locations for NP_001258656.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) contains a distinct 5' UTR and lacks an in-frame portion of the 5' coding region, compared to variant 1. The resulting isoform (2) has a shorter N-terminus, compared to isoform 1. Variants 2, 3, and 5 encode the same isoform (2).
- Source sequence(s)
-
AK147275, CA751006, CJ105472
- Consensus CDS
-
CCDS71256.1
- UniProtKB/Swiss-Prot
- Q3UHP5, Q5DU27, Q8C981, Q9ESN6
- UniProtKB/TrEMBL
-
Q3TPI3
- Related
- ENSMUSP00000103319.2, ENSMUST00000107691.8
- Conserved Domains (5) summary
-
- smart00502
Location:161 → 287
- BBC; B-Box C-terminal domain
- smart00557
Location:325 → 421
- IG_FLMN; Filamin-type immunoglobulin domains
- cd14960
Location:471 → 744
- NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
- cd16767
Location:20 → 65
- RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
- cd19824
Location:115 → 156
- Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins
-
NM_001271728.1 → NP_001258657.1 tripartite motif-containing protein 2 isoform 2
See identical proteins and their annotated locations for NP_001258657.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) contains a distinct 5' UTR and lacks an in-frame portion of the 5' coding region, compared to variant 1. The resulting isoform (2) has a shorter N-terminus, compared to isoform 1. Variants 2, 3, and 5 encode the same isoform (2).
- Source sequence(s)
-
AK147275, BC058961, CA751006
- Consensus CDS
-
CCDS71256.1
- UniProtKB/Swiss-Prot
- Q3UHP5, Q5DU27, Q8C981, Q9ESN6
- UniProtKB/TrEMBL
-
Q3TPI3
- Related
- ENSMUSP00000069922.7, ENSMUST00000065380.13
- Conserved Domains (5) summary
-
- smart00502
Location:161 → 287
- BBC; B-Box C-terminal domain
- smart00557
Location:325 → 421
- IG_FLMN; Filamin-type immunoglobulin domains
- cd14960
Location:471 → 744
- NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
- cd16767
Location:20 → 65
- RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
- cd19824
Location:115 → 156
- Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins
-
NM_030706.3 → NP_109631.2 tripartite motif-containing protein 2 isoform 3
See identical proteins and their annotated locations for NP_109631.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) contains a distinct 5' UTR and differs in the 5' coding region, compared to variant 1. The resulting isoform (3) has a shorter and distinct N-terminus, compared to isoform 1.
- Source sequence(s)
-
AK147275, CA751006, CD803806
- Consensus CDS
-
CCDS17437.2
- UniProtKB/TrEMBL
- Q3UHH4, Q3URK9
- Related
- ENSMUSP00000103323.3, ENSMUST00000107695.9
- Conserved Domains (5) summary
-
- smart00502
Location:178 → 304
- BBC; B-Box C-terminal domain
- smart00557
Location:342 → 438
- IG_FLMN; Filamin-type immunoglobulin domains
- cd14960
Location:488 → 761
- NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
- cd16767
Location:37 → 82
- RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
- cd19824
Location:132 → 173
- Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000069.7 Reference GRCm39 C57BL/6J
- Range
-
84067746..84215659 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_030252918.1 → XP_030108778.1 tripartite motif-containing protein 2 isoform X6
- UniProtKB/TrEMBL
-
Q3URK9
- Conserved Domains (5) summary
-
- smart00502
Location:179 → 305
- BBC; B-Box C-terminal domain
- smart00557
Location:343 → 439
- IG_FLMN; Filamin-type immunoglobulin domains
- cd14960
Location:489 → 762
- NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
- cd16767
Location:38 → 83
- RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
- cd19824
Location:133 → 174
- Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins
-
XM_011240298.3 → XP_011238600.1 tripartite motif-containing protein 2 isoform X4
- UniProtKB/TrEMBL
-
Q3URK9
- Conserved Domains (5) summary
-
- smart00502
Location:179 → 305
- BBC; B-Box C-terminal domain
- smart00557
Location:343 → 439
- IG_FLMN; Filamin-type immunoglobulin domains
- cd14960
Location:489 → 766
- NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
- cd16767
Location:38 → 83
- RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
- cd19824
Location:133 → 174
- Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins
-
XM_017319814.3 → XP_017175303.1 tripartite motif-containing protein 2 isoform X8
- UniProtKB/Swiss-Prot
- Q3UHP5, Q5DU27, Q8C981, Q9ESN6
- UniProtKB/TrEMBL
-
Q3TPI3
- Conserved Domains (5) summary
-
- smart00502
Location:161 → 287
- BBC; B-Box C-terminal domain
- smart00557
Location:325 → 421
- IG_FLMN; Filamin-type immunoglobulin domains
- cd14960
Location:471 → 744
- NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
- cd16767
Location:20 → 65
- RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
- cd19824
Location:115 → 156
- Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins
-
XM_011240301.4 → XP_011238603.1 tripartite motif-containing protein 2 isoform X7
See identical proteins and their annotated locations for XP_011238603.1
- UniProtKB/TrEMBL
-
Q3TPI3
- Conserved Domains (5) summary
-
- smart00502
Location:161 → 287
- BBC; B-Box C-terminal domain
- smart00557
Location:325 → 421
- IG_FLMN; Filamin-type immunoglobulin domains
- cd14960
Location:471 → 748
- NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
- cd16767
Location:20 → 65
- RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
- cd19824
Location:115 → 156
- Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins
-
XM_017319813.3 → XP_017175302.1 tripartite motif-containing protein 2 isoform X3
- UniProtKB/TrEMBL
-
Q3URK9
- Conserved Domains (5) summary
-
- smart00502
Location:183 → 309
- BBC; B-Box C-terminal domain
- smart00557
Location:347 → 443
- IG_FLMN; Filamin-type immunoglobulin domains
- cd14960
Location:493 → 766
- NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
- cd16767
Location:42 → 87
- RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
- cd19824
Location:137 → 178
- Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins
-
XM_011240302.3 → XP_011238604.1 tripartite motif-containing protein 2 isoform X7
See identical proteins and their annotated locations for XP_011238604.1
- UniProtKB/TrEMBL
-
Q3TPI3
- Conserved Domains (5) summary
-
- smart00502
Location:161 → 287
- BBC; B-Box C-terminal domain
- smart00557
Location:325 → 421
- IG_FLMN; Filamin-type immunoglobulin domains
- cd14960
Location:471 → 748
- NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
- cd16767
Location:20 → 65
- RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
- cd19824
Location:115 → 156
- Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins
-
XM_030252917.2 → XP_030108777.1 tripartite motif-containing protein 2 isoform X3
- UniProtKB/TrEMBL
-
Q3URK9
- Conserved Domains (5) summary
-
- smart00502
Location:183 → 309
- BBC; B-Box C-terminal domain
- smart00557
Location:347 → 443
- IG_FLMN; Filamin-type immunoglobulin domains
- cd14960
Location:493 → 766
- NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
- cd16767
Location:42 → 87
- RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
- cd19824
Location:137 → 178
- Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins
-
XM_011240297.3 → XP_011238599.1 tripartite motif-containing protein 2 isoform X2
- UniProtKB/TrEMBL
-
Q3URK9
- Conserved Domains (5) summary
-
- smart00502
Location:183 → 309
- BBC; B-Box C-terminal domain
- smart00557
Location:347 → 443
- IG_FLMN; Filamin-type immunoglobulin domains
- cd14960
Location:493 → 770
- NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
- cd16767
Location:42 → 87
- RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
- cd19824
Location:137 → 178
- Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins
-
XM_011240296.2 → XP_011238598.1 tripartite motif-containing protein 2 isoform X1
- UniProtKB/TrEMBL
-
Q3URK9
- Conserved Domains (5) summary
-
- smart00502
Location:187 → 313
- BBC; B-Box C-terminal domain
- smart00557
Location:351 → 447
- IG_FLMN; Filamin-type immunoglobulin domains
- cd14960
Location:497 → 774
- NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
- cd16767
Location:46 → 91
- RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
- cd19824
Location:141 → 182
- Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins
-
XM_011240300.4 → XP_011238602.1 tripartite motif-containing protein 2 isoform X7
See identical proteins and their annotated locations for XP_011238602.1
- UniProtKB/TrEMBL
-
Q3TPI3
- Conserved Domains (5) summary
-
- smart00502
Location:161 → 287
- BBC; B-Box C-terminal domain
- smart00557
Location:325 → 421
- IG_FLMN; Filamin-type immunoglobulin domains
- cd14960
Location:471 → 748
- NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
- cd16767
Location:20 → 65
- RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
- cd19824
Location:115 → 156
- Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins
-
XM_011240299.4 → XP_011238601.1 tripartite motif-containing protein 2 isoform X5
- UniProtKB/TrEMBL
-
Q3URK9
- Conserved Domains (5) summary
-
- smart00502
Location:178 → 304
- BBC; B-Box C-terminal domain
- smart00557
Location:342 → 438
- IG_FLMN; Filamin-type immunoglobulin domains
- cd14960
Location:488 → 765
- NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
- cd16767
Location:37 → 82
- RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
- cd19824
Location:132 → 173
- Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins
-
XM_017319815.3 → XP_017175304.1 tripartite motif-containing protein 2 isoform X9
- Conserved Domains (2) summary
-
- smart00557
Location:49 → 145
- IG_FLMN; Filamin-type immunoglobulin domains
- cd14960
Location:195 → 468
- NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
-
XM_011240304.4 → XP_011238606.1 tripartite motif-containing protein 2 isoform X7
See identical proteins and their annotated locations for XP_011238606.1
- UniProtKB/TrEMBL
-
Q3TPI3
- Conserved Domains (5) summary
-
- smart00502
Location:161 → 287
- BBC; B-Box C-terminal domain
- smart00557
Location:325 → 421
- IG_FLMN; Filamin-type immunoglobulin domains
- cd14960
Location:471 → 748
- NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
- cd16767
Location:20 → 65
- RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
- cd19824
Location:115 → 156
- Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins
-
XM_030252919.2 → XP_030108779.1 tripartite motif-containing protein 2 isoform X8
- UniProtKB/Swiss-Prot
- Q3UHP5, Q5DU27, Q8C981, Q9ESN6
- UniProtKB/TrEMBL
-
Q3TPI3
- Related
- ENSMUSP00000103321.3, ENSMUST00000107693.9
- Conserved Domains (5) summary
-
- smart00502
Location:161 → 287
- BBC; B-Box C-terminal domain
- smart00557
Location:325 → 421
- IG_FLMN; Filamin-type immunoglobulin domains
- cd14960
Location:471 → 744
- NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
- cd16767
Location:20 → 65
- RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
- cd19824
Location:115 → 156
- Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins
-
XM_036163422.1 → XP_036019315.1 tripartite motif-containing protein 2 isoform X7
- UniProtKB/TrEMBL
-
Q3TPI3
- Conserved Domains (5) summary
-
- smart00502
Location:161 → 287
- BBC; B-Box C-terminal domain
- smart00557
Location:325 → 421
- IG_FLMN; Filamin-type immunoglobulin domains
- cd14960
Location:471 → 748
- NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
- cd16767
Location:20 → 65
- RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
- cd19824
Location:115 → 156
- Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins
-
XM_011240303.4 → XP_011238605.1 tripartite motif-containing protein 2 isoform X7
See identical proteins and their annotated locations for XP_011238605.1
- UniProtKB/TrEMBL
-
Q3TPI3
- Conserved Domains (5) summary
-
- smart00502
Location:161 → 287
- BBC; B-Box C-terminal domain
- smart00557
Location:325 → 421
- IG_FLMN; Filamin-type immunoglobulin domains
- cd14960
Location:471 → 748
- NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
- cd16767
Location:20 → 65
- RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
- cd19824
Location:115 → 156
- Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins
-
XM_011240305.1 → XP_011238607.1 tripartite motif-containing protein 2 isoform X10
- Conserved Domains (4) summary
-
- smart00502
Location:161 → 235
- BBC; B-Box C-terminal domain
- cd00162
Location:23 → 63
- RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
- cl00034
Location:115 → 156
- Bbox_SF; B-box-type zinc finger superfamily
- cl17238
Location:20 → 65
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain