Conserved Protein Domain Family
RING-HC_TRIM2

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cd16767: RING-HC_TRIM2 (this model, PSSM-Id:319681 is obsolete and has been replaced by 438423)
RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
TRIM2, also known as RING finger protein 86 (RNF86), is an E3 ubiquitin-protein ligase that ubiquitinates the neurofilament light chain, a component of the intermediate filament in axons. Loss of function of TRIM2 results in early-onset axonal neuropathy. TRIM2 also plays a role in mediating the p42/p44 MAPK-dependent ubiquitination of the cell death-promoting protein Bcl-2-interacting mediator of cell death (Bim) in rapid ischemic tolerance. TRIM2 belongs to the C-VII subclass of TRIM (tripartite motif)-NHL family that is defined by their N-terminal RBCC (RING, Bbox, and coiled coil) domains, including three consecutive zinc-binding domains, a C3HC4-type RING-HC finger, Bbox1 and Bbox2, and a coiled coil domain, as well as a NHL (named after proteins NCL-1, HT2A and Lin-41 that contain repeats folded into a six-bladed beta propeller) repeat domain positioned C-terminal to the RBCC domain.
Statistics
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PSSM-Id: 319681
Aligned: 5 rows
Threshold Bit Score: 103.19
Created: 28-Jul-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Zn binding siteRING-HC finger
Feature 1:Zn binding site [ion binding site]
Evidence:
  • Comment:Based on the structural evidence that Homo sapiens transcription factor PML (1BOR) binds two Zn2+ ions through its RING-HC finger.
  • Citation:PMID 8317827
  • Citation:PMID 7729428

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1           #  #           # #  #  #             #  #  
Q9C040        20 FLICSICLERYknPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQ 65  human
NP_001014393  20 FLICSICLDRYnnPKVLPCLHTFCERCLQNYIPPHSLTLSCPVCRQ 65  zebrafish
NP_001086096  20 FLICSICLDRYknPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQ 65  African clawed frog
NP_001244243  20 FLICSICLDRYknPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQ 65  chicken
XP_007902181  20 FLICSICLERYniPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQ 65  elephant shark

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