NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001135215.1 → NP_001128687.1 zinc finger and SCAN domain-containing protein 31 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) initiates transcription from an alternate promoter and differs in the 5' UTR compared to variant 1. Variants 1, 2, 3, 4 and 7 encode the same isoform (1).
- Source sequence(s)
-
AF513019, AK095261, AL021997
- Consensus CDS
-
CCDS4649.1
- UniProtKB/Swiss-Prot
- Q6P178, Q8WWS5, Q96LW9
- Related
- ENSP00000390076.1, ENST00000414429.5
- Conserved Domains (6) summary
-
- smart00431
Location:35 → 146
- SCAN; leucine rich region
- COG5048
Location:156 → 397
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:241 → 261
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam00096
Location:239 → 261
- zf-C2H2; Zinc finger, C2H2 type
- pfam02023
Location:35 → 123
- SCAN; SCAN domain
- pfam13465
Location:310 → 332
- zf-H2C2_2; Zinc-finger double domain
-
NM_001135216.1 → NP_001128688.1 zinc finger and SCAN domain-containing protein 31 isoform 1
See identical proteins and their annotated locations for NP_001128688.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR compared to variant 1. Variants 1, 2, 3, 4 and 7 encode the same isoform (1).
- Source sequence(s)
-
AF513019, AL833617, BC008490
- Consensus CDS
-
CCDS4649.1
- UniProtKB/Swiss-Prot
- Q6P178, Q8WWS5, Q96LW9
- Related
- ENSP00000413705.1, ENST00000439158.5
- Conserved Domains (6) summary
-
- smart00431
Location:35 → 146
- SCAN; leucine rich region
- COG5048
Location:156 → 397
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:241 → 261
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam00096
Location:239 → 261
- zf-C2H2; Zinc finger, C2H2 type
- pfam02023
Location:35 → 123
- SCAN; SCAN domain
- pfam13465
Location:310 → 332
- zf-H2C2_2; Zinc-finger double domain
-
NM_001243241.1 → NP_001230170.1 zinc finger and SCAN domain-containing protein 31 isoform 1
See identical proteins and their annotated locations for NP_001230170.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (7) differs in the 5' UTR compared to variant 1. Variants 1, 2, 3, 4 and 7 encode the same isoform (1).
- Source sequence(s)
-
BC065241, DA875036, DN995648
- Consensus CDS
-
CCDS4649.1
- UniProtKB/Swiss-Prot
- Q6P178, Q8WWS5, Q96LW9
- Conserved Domains (6) summary
-
- smart00431
Location:35 → 146
- SCAN; leucine rich region
- COG5048
Location:156 → 397
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:241 → 261
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam00096
Location:239 → 261
- zf-C2H2; Zinc finger, C2H2 type
- pfam02023
Location:35 → 123
- SCAN; SCAN domain
- pfam13465
Location:310 → 332
- zf-H2C2_2; Zinc-finger double domain
-
NM_001243242.1 → NP_001230171.1 zinc finger and SCAN domain-containing protein 31 isoform 2
See identical proteins and their annotated locations for NP_001230171.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (8) differs in the 5' UTR, lacks a portion of the 5' coding region, and uses a downstream, in-frame start codon, compared to variant 1. Variants 5, 6 and 8 encode the same isoform (2), which has a shorter N-terminus compared to isoform 1.
- Source sequence(s)
-
BC065241, DA875036, DA879276
- Consensus CDS
-
CCDS59001.1
- UniProtKB/Swiss-Prot
-
Q96LW9
- Related
- ENSP00000480254.1, ENST00000611469.4
- Conserved Domains (2) summary
-
- COG5048
Location:79 → 238
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:82 → 102
- ZF_C2H2; C2H2 Zn finger [structural motif]
-
NM_001243243.1 → NP_001230172.1 zinc finger and SCAN domain-containing protein 31 isoform 2
See identical proteins and their annotated locations for NP_001230172.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR, lacks a portion of the 5' coding region, and uses a downstream, in-frame start codon, compared to variant 1. Variants 5, 6 and 8 encode the same isoform (2), which has a shorter N-terminus compared to isoform 1.
- Source sequence(s)
-
AL833617, BC065241
- Consensus CDS
-
CCDS59001.1
- UniProtKB/Swiss-Prot
-
Q96LW9
- Related
- ENSP00000402937.1, ENST00000446474.5
- Conserved Domains (2) summary
-
- COG5048
Location:79 → 238
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:82 → 102
- ZF_C2H2; C2H2 Zn finger [structural motif]
-
NM_001243244.1 → NP_001230173.1 zinc finger and SCAN domain-containing protein 31 isoform 2
See identical proteins and their annotated locations for NP_001230173.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) lacks a portion of the 5' coding region and uses a downstream, in-frame start codon, compared to variant 1. Variants 5, 6 and 8 encode the same isoform (2), which has a shorter N-terminus compared to isoform 1.
- Source sequence(s)
-
BC065241, DA875036
- Consensus CDS
-
CCDS59001.1
- UniProtKB/Swiss-Prot
-
Q96LW9
- Related
- ENSP00000391235.1, ENST00000435857.5
- Conserved Domains (2) summary
-
- COG5048
Location:79 → 238
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:82 → 102
- ZF_C2H2; C2H2 Zn finger [structural motif]
-
NM_030899.5 → NP_112161.3 zinc finger and SCAN domain-containing protein 31 isoform 1
See identical proteins and their annotated locations for NP_112161.3
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes isoform 1. Variants 1, 2, 3, 4 and 7 encode the same isoform (1).
- Source sequence(s)
-
AL021997
- Consensus CDS
-
CCDS4649.1
- UniProtKB/Swiss-Prot
- Q6P178, Q8WWS5, Q96LW9
- Related
- ENSP00000345339.6, ENST00000344279.11
- Conserved Domains (6) summary
-
- smart00431
Location:35 → 146
- SCAN; leucine rich region
- COG5048
Location:156 → 397
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:241 → 261
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam00096
Location:239 → 261
- zf-C2H2; Zinc finger, C2H2 type
- pfam02023
Location:35 → 123
- SCAN; SCAN domain
- pfam13465
Location:310 → 332
- zf-H2C2_2; Zinc-finger double domain
-
NM_145909.3 → NP_665916.1 zinc finger and SCAN domain-containing protein 31 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1, 2, 3, 4 and 7 encode the same isoform (1).
- Source sequence(s)
-
AF513019, AL021997
- Consensus CDS
-
CCDS4649.1
- UniProtKB/Swiss-Prot
- Q6P178, Q8WWS5, Q96LW9
- Related
- ENSP00000380050.2, ENST00000396838.6
- Conserved Domains (6) summary
-
- smart00431
Location:35 → 146
- SCAN; leucine rich region
- COG5048
Location:156 → 397
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:241 → 261
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam00096
Location:239 → 261
- zf-C2H2; Zinc finger, C2H2 type
- pfam02023
Location:35 → 123
- SCAN; SCAN domain
- pfam13465
Location:310 → 332
- zf-H2C2_2; Zinc-finger double domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000006.12 Reference GRCh38.p14 Primary Assembly
- Range
-
28324737..28356271 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_024446521.2 → XP_024302289.1 zinc finger and SCAN domain-containing protein 31 isoform X2
- Conserved Domains (2) summary
-
- COG5048
Location:122 → 281
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:125 → 145
- ZF_C2H2; C2H2 Zn finger [structural motif]
-
XM_011514808.4 → XP_011513110.1 zinc finger and SCAN domain-containing protein 31 isoform X1
See identical proteins and their annotated locations for XP_011513110.1
- UniProtKB/Swiss-Prot
- Q6P178, Q8WWS5, Q96LW9
- Conserved Domains (6) summary
-
- smart00431
Location:35 → 146
- SCAN; leucine rich region
- COG5048
Location:156 → 397
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:241 → 261
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam00096
Location:239 → 261
- zf-C2H2; Zinc finger, C2H2 type
- pfam02023
Location:35 → 123
- SCAN; SCAN domain
- pfam13465
Location:310 → 332
- zf-H2C2_2; Zinc-finger double domain
-
XM_047419257.1 → XP_047275213.1 zinc finger and SCAN domain-containing protein 31 isoform X1
- UniProtKB/Swiss-Prot
- Q6P178, Q8WWS5, Q96LW9
-
XM_024446522.2 → XP_024302290.1 zinc finger and SCAN domain-containing protein 31 isoform X3
- Conserved Domains (2) summary
-
- COG5048
Location:79 → 238
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:82 → 102
- ZF_C2H2; C2H2 Zn finger [structural motif]
-
XM_005249296.6 → XP_005249353.1 zinc finger and SCAN domain-containing protein 31 isoform X1
See identical proteins and their annotated locations for XP_005249353.1
- UniProtKB/Swiss-Prot
- Q6P178, Q8WWS5, Q96LW9
- Conserved Domains (6) summary
-
- smart00431
Location:35 → 146
- SCAN; leucine rich region
- COG5048
Location:156 → 397
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:241 → 261
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam00096
Location:239 → 261
- zf-C2H2; Zinc finger, C2H2 type
- pfam02023
Location:35 → 123
- SCAN; SCAN domain
- pfam13465
Location:310 → 332
- zf-H2C2_2; Zinc-finger double domain
-
XM_005249295.2 → XP_005249352.1 zinc finger and SCAN domain-containing protein 31 isoform X1
See identical proteins and their annotated locations for XP_005249352.1
- UniProtKB/Swiss-Prot
- Q6P178, Q8WWS5, Q96LW9
- Conserved Domains (6) summary
-
- smart00431
Location:35 → 146
- SCAN; leucine rich region
- COG5048
Location:156 → 397
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:241 → 261
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam00096
Location:239 → 261
- zf-C2H2; Zinc finger, C2H2 type
- pfam02023
Location:35 → 123
- SCAN; SCAN domain
- pfam13465
Location:310 → 332
- zf-H2C2_2; Zinc-finger double domain
-
XM_047419255.1 → XP_047275211.1 zinc finger and SCAN domain-containing protein 31 isoform X1
- UniProtKB/Swiss-Prot
- Q6P178, Q8WWS5, Q96LW9
-
XM_047419254.1 → XP_047275210.1 zinc finger and SCAN domain-containing protein 31 isoform X1
- UniProtKB/Swiss-Prot
- Q6P178, Q8WWS5, Q96LW9
-
XM_047419256.1 → XP_047275212.1 zinc finger and SCAN domain-containing protein 31 isoform X1
- UniProtKB/Swiss-Prot
- Q6P178, Q8WWS5, Q96LW9
-
XM_047419253.1 → XP_047275209.1 zinc finger and SCAN domain-containing protein 31 isoform X1
- UniProtKB/Swiss-Prot
- Q6P178, Q8WWS5, Q96LW9
-
XM_011514809.2 → XP_011513111.1 zinc finger and SCAN domain-containing protein 31 isoform X1
See identical proteins and their annotated locations for XP_011513111.1
- UniProtKB/Swiss-Prot
- Q6P178, Q8WWS5, Q96LW9
- Conserved Domains (6) summary
-
- smart00431
Location:35 → 146
- SCAN; leucine rich region
- COG5048
Location:156 → 397
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:241 → 261
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam00096
Location:239 → 261
- zf-C2H2; Zinc finger, C2H2 type
- pfam02023
Location:35 → 123
- SCAN; SCAN domain
- pfam13465
Location:310 → 332
- zf-H2C2_2; Zinc-finger double domain
-
XM_011514812.3 → XP_011513114.1 zinc finger and SCAN domain-containing protein 31 isoform X1
See identical proteins and their annotated locations for XP_011513114.1
- UniProtKB/Swiss-Prot
- Q6P178, Q8WWS5, Q96LW9
- Conserved Domains (6) summary
-
- smart00431
Location:35 → 146
- SCAN; leucine rich region
- COG5048
Location:156 → 397
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:241 → 261
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam00096
Location:239 → 261
- zf-C2H2; Zinc finger, C2H2 type
- pfam02023
Location:35 → 123
- SCAN; SCAN domain
- pfam13465
Location:310 → 332
- zf-H2C2_2; Zinc-finger double domain
RNA
-
XR_007059330.1 RNA Sequence
-
XR_002956295.2 RNA Sequence
-
XR_007059331.1 RNA Sequence
-
XR_002956296.2 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060930.1 Alternate T2T-CHM13v2.0
- Range
-
28196485..28227848 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054356233.1 → XP_054212208.1 zinc finger and SCAN domain-containing protein 31 isoform X2
-
XM_054356232.1 → XP_054212207.1 zinc finger and SCAN domain-containing protein 31 isoform X1
-
XM_054356231.1 → XP_054212206.1 zinc finger and SCAN domain-containing protein 31 isoform X1
-
XM_054356236.1 → XP_054212211.1 zinc finger and SCAN domain-containing protein 31 isoform X3
- UniProtKB/TrEMBL
-
Q8N3P9
-
XM_054356227.1 → XP_054212202.1 zinc finger and SCAN domain-containing protein 31 isoform X1
-
XM_054356234.1 → XP_054212209.1 zinc finger and SCAN domain-containing protein 31 isoform X3
- UniProtKB/TrEMBL
-
Q8N3P9
-
XM_054356226.1 → XP_054212201.1 zinc finger and SCAN domain-containing protein 31 isoform X1
-
XM_054356222.1 → XP_054212197.1 zinc finger and SCAN domain-containing protein 31 isoform X1
-
XM_054356235.1 → XP_054212210.1 zinc finger and SCAN domain-containing protein 31 isoform X3
- UniProtKB/TrEMBL
-
Q8N3P9
-
XM_054356225.1 → XP_054212200.1 zinc finger and SCAN domain-containing protein 31 isoform X1
-
XM_054356223.1 → XP_054212198.1 zinc finger and SCAN domain-containing protein 31 isoform X1
-
XM_054356228.1 → XP_054212203.1 zinc finger and SCAN domain-containing protein 31 isoform X1
-
XM_054356224.1 → XP_054212199.1 zinc finger and SCAN domain-containing protein 31 isoform X1
-
XM_054356229.1 → XP_054212204.1 zinc finger and SCAN domain-containing protein 31 isoform X1
-
XM_054356230.1 → XP_054212205.1 zinc finger and SCAN domain-containing protein 31 isoform X1
RNA
-
XR_008487429.1 RNA Sequence
-
XR_008487426.1 RNA Sequence
-
XR_008487428.1 RNA Sequence
-
XR_008487427.1 RNA Sequence