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    PTCRA pre T cell antigen receptor alpha [ Bos taurus (domestic cattle) ]

    Gene ID: 513669, updated on 4-Oct-2024

    Summary

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    Official Symbol
    PTCRAprovided by VGNC
    Official Full Name
    pre T cell antigen receptor alphaprovided by VGNC
    Primary source
    VGNC:VGNC:33494
    See related
    BGD:BT24355; Ensembl:ENSBTAG00000017097
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See PTCRA in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 23 NC_037350.1 (16547283..16552639)

    Chromosome 23 - NC_037350.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein L7 like 1 Neighboring gene chromosome 23 C6orf226 homolog Neighboring gene uncharacterized LOC104969653 Neighboring gene canopy FGF signaling regulator 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037350.1 Chromosome 23 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Clone Names

    • MGC140432

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in negative regulation of thymocyte apoptotic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pre T-cell antigen receptor alpha
    Names
    pT-alpha
    pT-alpha-TCR
    pTa

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001075633.1 → NP_001069101.1  pre T-cell antigen receptor alpha precursor

      See identical proteins and their annotated locations for NP_001069101.1

      Status: PROVISIONAL

      Source sequence(s)
      BC120034
      UniProtKB/Swiss-Prot
      Q0VCS0
      UniProtKB/TrEMBL
      A0A3Q1M476
      Related
      ENSBTAP00000044273.1, ENSBTAT00000047035.2
      Conserved Domains (1) summary
      pfam15028
      Location:31 → 156
      PTCRA; Pre-T-cell antigen receptor

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037350.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      16547283..16552639
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005223419.4 → XP_005223476.1  pre T-cell antigen receptor alpha isoform X1

      UniProtKB/TrEMBL
      A0A3Q1M476
      Conserved Domains (1) summary
      pfam15028
      Location:51 → 176
      PTCRA; Pre-T-cell antigen receptor
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0VCS0.1 GenPept UniProtKB/Swiss-Prot:Q0VCS0

    Gene LinkOut

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