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DEHA2G22682g DEHA2G22682p [ Debaryomyces hansenii CBS767 ]

Gene ID: 8999286, updated on 17-May-2024

Summary

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Gene symbol
DEHA2G22682g
Gene description
DEHA2G22682p
Locus tag
DEHA2G22682g
See related
FungiDB:DEHA2G22682g; VEuPathDB:DEHA2G22682g
Gene type
protein coding
RNA name
DEHA2G22682p
RefSeq status
PROVISIONAL
Organism
Debaryomyces hansenii CBS767 (strain: CBS767, type-material: culture from type material of Debaryomyces hansenii)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Debaryomyces
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Genomic context

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See DEHA2G22682g in Genome Data Viewer
Location:
chromosome: G
Exon count:
1
Sequence:
Chromosome: G; NC_006049.2 (1844486..1848580, complement)

Chromosome G - NC_006049.2Genomic Context describing neighboring genes Neighboring gene DEHA2G22638p Neighboring gene DEHA2G22660p Neighboring gene DEHA2G22704p Neighboring gene DEHA2G22726p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006049.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome evolution in yeasts. Dujon B, et al. Nature, 2004 Jul 1. PMID 15229592
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent chromatin remodeler activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Ino80 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DEHA2G22682p
XP_002770708.1
  • similar to uniprot|P53115 Saccharomyces cerevisiae YGL150C INO80 ATPase that forms a large complex containing actin and several actin-related proteins that has chromatin remodeling activity and 3' to 5' DNA helicase activity in vitro

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006049.2 Reference assembly

    Range
    1844486..1848580 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002770662.1 → XP_002770708.1  DEHA2G22682p [Debaryomyces hansenii CBS767]

    See identical proteins and their annotated locations for XP_002770708.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    B5RUY3, Q6BGY8
    Conserved Domains (4) summary
    cd00046
    Location:587 → 733
    DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
    pfam00176
    Location:570 → 869
    SNF2_N; SNF2 family N-terminal domain
    pfam00271
    Location:1141 → 1255
    Helicase_C; Helicase conserved C-terminal domain
    pfam13892
    Location:328 → 461
    DBINO; DNA-binding domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6BGY8.2

Gene LinkOut

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Molecular Biology Databases
Research Materials