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[ Dictyostelium discoideum AX4 ]

Gene ID: 8619424, updated on 22-Aug-2024

Summary

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Primary source
dictyBase:DDB_G0274833
Locus tag
DDB_G0274833
See related
AmoebaDB:DDB_G0274833; VEuPathDB:DDB_G0274833
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Dictyostelium discoideum AX4 (strain: AX4)
Lineage
Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales; Dictyosteliaceae; Dictyostelium
Old locus tag
DDBDRAFT_0217502; DDB_0217502
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Genomic context

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Location:
chromosome: 2
Exon count:
3
Sequence:
Chromosome: 2; NC_007088.5 (4072005..4073042, complement)

Chromosome 2 - NC_007088.5Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene RWP-RK domain-containing protein Neighboring gene Ras guanine nucleotide exchange factor Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007088.5

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of Dictyostelium discoideum. Glöckner G, et al. Nature, 2002 Jul 4. PMID 12097910
  2. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by dictyBase

Function Evidence Code Pubs
enables kinase activator activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables molecular adaptor activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
involved_in cellular response to amino acid stimulus IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in positive regulation of MAPK cascade ISS
Inferred from Sequence or Structural Similarity
more info
  
involved_in positive regulation of TOR signaling IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in regulation of TOR signaling IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of Ragulator complex IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007088.5 Reference assembly

    Range
    4072005..4073042 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_638906.1 → XP_643998.1  hypothetical protein DDB_G0274833 [Dictyostelium discoideum AX4]

    See identical proteins and their annotated locations for XP_643998.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q555R5, Q86J23
    Conserved Domains (1) summary
    pfam08923
    Location:2 → 129
    MAPKK1_Int; Mitogen-activated protein kinase kinase 1 interacting
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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