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CUB1 [ Saccharomyces cerevisiae S288C ]

Gene ID: 855867, updated on 22-Aug-2024

Summary

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Official Symbol
CUB1
Primary source
FungiDB:YPL260W
Locus tag
YPL260W
See related
SGD:S000006181; AllianceGenome:SGD:S000006181; VEuPathDB:YPL260W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Located in cytoplasm and nucleus. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See CUB1 in Genome Data Viewer
Location:
chromosome: XVI
Exon count:
1
Sequence:
Chromosome: XVI; NC_001148.4 (49303..50958)

Chromosome XVI - NC_001148.4Genomic Context describing neighboring genes Neighboring gene Kel3p Neighboring gene fumarase FUM1 Neighboring gene uncharacterized protein Neighboring gene Apm1p Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001148.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An evolutionary proteomics approach identifies substrates of the cAMP-dependent protein kinase. Budovskaya YV, et al. Proc Natl Acad Sci U S A, 2005 Sep 27. PMID 16172400, Free PMC Article
  2. Insight into the Antioxidant Effect of Fermented and Non-Fermented Spirulina Water and Ethanol Extracts at the Proteome Level Using a Yeast Cell Model. Masten Rutar J, et al. Antioxidants (Basel), 2021 Aug 27. PMID 34572998, Free PMC Article
  3. The Lsm1-7/Pat1 complex binds to stress-activated mRNAs and modulates the response to hyperosmotic shock. Garre E, et al. PLoS Genet, 2018 Jul. PMID 30059503, Free PMC Article
  4. Protein acetylation microarray reveals that NuA4 controls key metabolic target regulating gluconeogenesis. Lin YY, et al. Cell, 2009 Mar 20. PMID 19303850, Free PMC Article
  5. Alterations in DNA replication and histone levels promote histone gene amplification in Saccharomyces cerevisiae. Libuda DE, et al. Genetics, 2010 Apr. PMID 20139344, Free PMC Article

See all (30) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytoplasm HDA PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus HDA PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Cub1p
NP_015063.1
  • Conserved fungal gene linked to DNA repair and proteasome function; putative substrate of cAMP-dependent protein kinase (PKA); green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; YPL260W is not an essential gene; protein abundance increases in response to DNA replication stress

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001148.4 Reference assembly

    Range
    49303..50958
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001184074.1 → NP_015063.1  TPA: Cub1p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_015063.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6W3A9, Q05760, Q08977, Q7LGU3
    UniProtKB/TrEMBL
    B3LKH2, C7GSG2, C8ZIB9, N1NX25
    Conserved Domains (1) summary
    pfam10303
    Location:209 → 372
    DUF2408; Protein of unknown function (DUF2408)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q08977.1

Gene LinkOut

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