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LOC8080103 GPI mannosyltransferase 3 [ Sorghum bicolor (sorghum) ]

Gene ID: 8080103, updated on 22-Oct-2023

Summary

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Gene symbol
LOC8080103
Gene description
GPI mannosyltransferase 3
Locus tag
SORBI_3009G194000
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Genomic context

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See LOC8080103 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 9 NC_012878.2 (54536591..54540801, complement)

Chromosome 9 - NC_012878.2Genomic Context describing neighboring genes Neighboring gene putative exosome complex exonuclease RRP42 Neighboring gene uncharacterized protein At2g02148 Neighboring gene E3 ubiquitin-protein ligase RNF38-like Neighboring gene probable xyloglucan glycosyltransferase 7 Neighboring gene uncharacterized LOC8080104

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012878.2 Chromosome 9 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012878.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    54536591..54540801 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021447644.1 → XP_021303319.1  GPI mannosyltransferase 3 isoform X1

    UniProtKB/TrEMBL
    A0A1B6P9I4, A0A1Z5R3C6, A0A921U5M7
    Conserved Domains (1) summary
    cl21590
    Location:1 → 541
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  2. XM_021447645.1 → XP_021303320.1  GPI mannosyltransferase 3 isoform X2

    Conserved Domains (1) summary
    cl21590
    Location:2 → 423
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
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