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Conserved domains on  [gi|1205981170|ref|XP_021303320|]
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GPI mannosyltransferase 3 isoform X2 [Sorghum bicolor]

Protein Classification

glycosyltransferase family protein( domain architecture ID 229536)

glycosyltransferase family protein may synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PMT_2 super family cl21590
Dolichyl-phosphate-mannose-protein mannosyltransferase; This family contains members that are ...
 2-423 8.09e-173

Dolichyl-phosphate-mannose-protein mannosyltransferase; This family contains members that are not captured by pfam02366.


The actual alignment was detected with superfamily member PLN02816:

Pssm-ID: 473917  Cd Length: 546  Bit Score: 494.94  E-value: 8.09e-173
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1205981170   2 APRLLQSVFAAFGDLYLYKFSKLIFNGQVAQWALFSQLVNWFMFFCITRTLSNSLETVLTVAGLYYWFTAIESSKATSIv 81
Cdd:PLN02816  120 APRLMQSIFSAIGDLYLYKLSDALYGGNVATWSLFCQMANWFIFFCLNRTFSNCLETVLTIMGLYYWPCIRDSSIDYPV- 198

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1205981170  82 skqhavceqsasSRKVALLIAALSCAIRPTSAVTWLYVGLLDFIQMKSKCRFVLLDVIPIGAIVLAVTTLLDWWMFGSRV 161
Cdd:PLN02816  199 ------------NRKWGLVIAALACAIRPTSAVIWLYVGMLELFLTPNKVKFIILEVIPIGSLVLGFTCLLDRLMYGSWV 266

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1205981170 162 IVPLNFLKFNLFSSGGDYYGTHVFHWYFTQGFPSMIWTFLPFAMYGIVKSREWRLSGLIAWVLGVYSILGHKEFRFVLPV 241
Cdd:PLN02816  267 IVPLNFLKFNFLSSGGDYYGTHPWHWYFTQGFLVMLFTFTPFSIAGIIKSKNQKLSALILWVLAIYSILGHKEFRFVLPV 346

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1205981170 242 LPLALMFSGYCLAAM--------SQLKAKNQHGKRSLS----RLQLSVILLVITNVPMSLYMSLFHQRGTEDVMYYLSKE 309
Cdd:PLN02816  347 LPIALIFSGYAFAQMevsgssssSSVTKKKQVPRQNHTkwspKLRLSVYFLLATNIPMALYMSLFHQRGTEDAMNYLSDE 426

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1205981170 310 AHDGRVKSVLFLMPCHSTPYYSTLHYDLPMRFLDCTPSDNKGTLDESDRFLTSPSEFVGGVFGNLST-FSHIVLFESEER 388
Cdd:PLN02816  427 AYKGRVKSILFLMPCHSTPYYSTLHRNIPMQFLDCTPSAEKGELDESDQFLVNPLGFASELARNWSEpPSHIVLFASEET 506

                         410       420       430
                  ....*....|....*....|....*....|....*
gi 1205981170 389 HVLQLLLHNSFLEVRRFFHSHFKVDRDLQSSVVVY 423
Cdd:PLN02816  507 KLRDFMIQHSFKEVRRFFHAHFKVDRDLQSSVVVY 541
 
Name Accession Description Interval E-value
PLN02816 PLN02816
mannosyltransferase
 2-423 8.09e-173

mannosyltransferase


Pssm-ID: 215437  Cd Length: 546  Bit Score: 494.94  E-value: 8.09e-173
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1205981170   2 APRLLQSVFAAFGDLYLYKFSKLIFNGQVAQWALFSQLVNWFMFFCITRTLSNSLETVLTVAGLYYWFTAIESSKATSIv 81
Cdd:PLN02816  120 APRLMQSIFSAIGDLYLYKLSDALYGGNVATWSLFCQMANWFIFFCLNRTFSNCLETVLTIMGLYYWPCIRDSSIDYPV- 198

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1205981170  82 skqhavceqsasSRKVALLIAALSCAIRPTSAVTWLYVGLLDFIQMKSKCRFVLLDVIPIGAIVLAVTTLLDWWMFGSRV 161
Cdd:PLN02816  199 ------------NRKWGLVIAALACAIRPTSAVIWLYVGMLELFLTPNKVKFIILEVIPIGSLVLGFTCLLDRLMYGSWV 266

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1205981170 162 IVPLNFLKFNLFSSGGDYYGTHVFHWYFTQGFPSMIWTFLPFAMYGIVKSREWRLSGLIAWVLGVYSILGHKEFRFVLPV 241
Cdd:PLN02816  267 IVPLNFLKFNFLSSGGDYYGTHPWHWYFTQGFLVMLFTFTPFSIAGIIKSKNQKLSALILWVLAIYSILGHKEFRFVLPV 346

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1205981170 242 LPLALMFSGYCLAAM--------SQLKAKNQHGKRSLS----RLQLSVILLVITNVPMSLYMSLFHQRGTEDVMYYLSKE 309
Cdd:PLN02816  347 LPIALIFSGYAFAQMevsgssssSSVTKKKQVPRQNHTkwspKLRLSVYFLLATNIPMALYMSLFHQRGTEDAMNYLSDE 426

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1205981170 310 AHDGRVKSVLFLMPCHSTPYYSTLHYDLPMRFLDCTPSDNKGTLDESDRFLTSPSEFVGGVFGNLST-FSHIVLFESEER 388
Cdd:PLN02816  427 AYKGRVKSILFLMPCHSTPYYSTLHRNIPMQFLDCTPSAEKGELDESDQFLVNPLGFASELARNWSEpPSHIVLFASEET 506

                         410       420       430
                  ....*....|....*....|....*....|....*
gi 1205981170 389 HVLQLLLHNSFLEVRRFFHSHFKVDRDLQSSVVVY 423
Cdd:PLN02816  507 KLRDFMIQHSFKEVRRFFHAHFKVDRDLQSSVVVY 541
Glyco_transf_22 pfam03901
Alg9-like mannosyltransferase family; Members of this family are mannosyltransferase enzymes. ...
 2-334 1.77e-75

Alg9-like mannosyltransferase family; Members of this family are mannosyltransferase enzymes. At least some members are localized in endoplasmic reticulum and involved in GPI anchor biosynthesis.


Pssm-ID: 281842  Cd Length: 414  Bit Score: 241.11  E-value: 1.77e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1205981170   2 APRLLQSVFAAFGDLYLYKFSKLIFNGQVAQWALFSQLVNWFMFFCITRTLSNSLETVLTVAGLYYWFTAIESSKATSiv 81
Cdd:pfam03901  82 APRLLLGLFSALCDYYLYRAVCRKYGLEIARWALLLSLTSWGMFFASTRTLPNSFEMILTSIALYYLLEYGNTSVSNY-- 159

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1205981170  82 skqhavceqsaSSRKVALLIAALSCAIRPTSAVTWLYVGLLDFIQMKSKCRFVLLDV-IPIGAIVLAVTT----LLDWWM 156
Cdd:pfam03901 160 -----------KYLKAVLLIAALAILGRPTSALLWLPLVLYLLLRLRGKRLKLFLFLaISLGLLVALLVLgaviLIDSYF 228

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1205981170 157 FGSRVIVPLNFLKFNLFSSGGDYYGTHVFHWYFTQGFPSMIWTFLPFAMYGIVK------SREWRLSGLIAWVLGVYSIL 230
Cdd:pfam03901 229 YGRFVFTPLNFLKYNVLSNGSSFYGTHPWYFYFSNGLPNILGPFLLAFILGPLVlllrkvSRLSQLLAPILIWLFIYSLQ 308

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1205981170 231 GHKEFRFVLPVLPLALMFSGYCLAAMSQLKAKnqhgkrsLSRLQLSVILLVITNVPMSLYMSLFHQRGTE----DVMYYL 306
Cdd:pfam03901 309 PHKEERFLYPVYPLILLSAAIALTRLSRRSWK-------VRKKLSLLFLLLFFNVSLARLFGLVHQYGAPlavyDVMSFL 381

                         330       340       350
                  ....*....|....*....|....*....|...
gi 1205981170 307 SKEA-----HDGRVKSVLFLMPCHSTPYYSTLH 334
Cdd:pfam03901 382 NETPrenrnPAGPPVNVCIGMECYSTPSSFFLH 414
 
Name Accession Description Interval E-value
PLN02816 PLN02816
mannosyltransferase
 2-423 8.09e-173

mannosyltransferase


Pssm-ID: 215437  Cd Length: 546  Bit Score: 494.94  E-value: 8.09e-173
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1205981170   2 APRLLQSVFAAFGDLYLYKFSKLIFNGQVAQWALFSQLVNWFMFFCITRTLSNSLETVLTVAGLYYWFTAIESSKATSIv 81
Cdd:PLN02816  120 APRLMQSIFSAIGDLYLYKLSDALYGGNVATWSLFCQMANWFIFFCLNRTFSNCLETVLTIMGLYYWPCIRDSSIDYPV- 198

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1205981170  82 skqhavceqsasSRKVALLIAALSCAIRPTSAVTWLYVGLLDFIQMKSKCRFVLLDVIPIGAIVLAVTTLLDWWMFGSRV 161
Cdd:PLN02816  199 ------------NRKWGLVIAALACAIRPTSAVIWLYVGMLELFLTPNKVKFIILEVIPIGSLVLGFTCLLDRLMYGSWV 266

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1205981170 162 IVPLNFLKFNLFSSGGDYYGTHVFHWYFTQGFPSMIWTFLPFAMYGIVKSREWRLSGLIAWVLGVYSILGHKEFRFVLPV 241
Cdd:PLN02816  267 IVPLNFLKFNFLSSGGDYYGTHPWHWYFTQGFLVMLFTFTPFSIAGIIKSKNQKLSALILWVLAIYSILGHKEFRFVLPV 346

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1205981170 242 LPLALMFSGYCLAAM--------SQLKAKNQHGKRSLS----RLQLSVILLVITNVPMSLYMSLFHQRGTEDVMYYLSKE 309
Cdd:PLN02816  347 LPIALIFSGYAFAQMevsgssssSSVTKKKQVPRQNHTkwspKLRLSVYFLLATNIPMALYMSLFHQRGTEDAMNYLSDE 426

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1205981170 310 AHDGRVKSVLFLMPCHSTPYYSTLHYDLPMRFLDCTPSDNKGTLDESDRFLTSPSEFVGGVFGNLST-FSHIVLFESEER 388
Cdd:PLN02816  427 AYKGRVKSILFLMPCHSTPYYSTLHRNIPMQFLDCTPSAEKGELDESDQFLVNPLGFASELARNWSEpPSHIVLFASEET 506

                         410       420       430
                  ....*....|....*....|....*....|....*
gi 1205981170 389 HVLQLLLHNSFLEVRRFFHSHFKVDRDLQSSVVVY 423
Cdd:PLN02816  507 KLRDFMIQHSFKEVRRFFHAHFKVDRDLQSSVVVY 541
Glyco_transf_22 pfam03901
Alg9-like mannosyltransferase family; Members of this family are mannosyltransferase enzymes. ...
 2-334 1.77e-75

Alg9-like mannosyltransferase family; Members of this family are mannosyltransferase enzymes. At least some members are localized in endoplasmic reticulum and involved in GPI anchor biosynthesis.


Pssm-ID: 281842  Cd Length: 414  Bit Score: 241.11  E-value: 1.77e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1205981170   2 APRLLQSVFAAFGDLYLYKFSKLIFNGQVAQWALFSQLVNWFMFFCITRTLSNSLETVLTVAGLYYWFTAIESSKATSiv 81
Cdd:pfam03901  82 APRLLLGLFSALCDYYLYRAVCRKYGLEIARWALLLSLTSWGMFFASTRTLPNSFEMILTSIALYYLLEYGNTSVSNY-- 159

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1205981170  82 skqhavceqsaSSRKVALLIAALSCAIRPTSAVTWLYVGLLDFIQMKSKCRFVLLDV-IPIGAIVLAVTT----LLDWWM 156
Cdd:pfam03901 160 -----------KYLKAVLLIAALAILGRPTSALLWLPLVLYLLLRLRGKRLKLFLFLaISLGLLVALLVLgaviLIDSYF 228

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1205981170 157 FGSRVIVPLNFLKFNLFSSGGDYYGTHVFHWYFTQGFPSMIWTFLPFAMYGIVK------SREWRLSGLIAWVLGVYSIL 230
Cdd:pfam03901 229 YGRFVFTPLNFLKYNVLSNGSSFYGTHPWYFYFSNGLPNILGPFLLAFILGPLVlllrkvSRLSQLLAPILIWLFIYSLQ 308

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1205981170 231 GHKEFRFVLPVLPLALMFSGYCLAAMSQLKAKnqhgkrsLSRLQLSVILLVITNVPMSLYMSLFHQRGTE----DVMYYL 306
Cdd:pfam03901 309 PHKEERFLYPVYPLILLSAAIALTRLSRRSWK-------VRKKLSLLFLLLFFNVSLARLFGLVHQYGAPlavyDVMSFL 381

                         330       340       350
                  ....*....|....*....|....*....|...
gi 1205981170 307 SKEA-----HDGRVKSVLFLMPCHSTPYYSTLH 334
Cdd:pfam03901 382 NETPrenrnPAGPPVNVCIGMECYSTPSSFFLH 414
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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