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Tmtc3 Transmembrane O-mannosyltransferase targeting cadherins 3 [ Drosophila persimilis ]

Gene ID: 6600863, updated on 15-May-2024

Summary

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Gene symbol
Tmtc3
Gene description
Transmembrane O-mannosyltransferase targeting cadherins 3
Locus tag
Dper_GL10177
See related
EnsemblRapid:LOC6600863
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila persimilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GL10177; GL10177-PA
Orthologs
fruit fly all
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Genomic context

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See Tmtc3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current DperRS2 (GCF_003286085.1) Unplaced Scaffold NW_020825289.1 (20565308..20570247, complement)

NW_020825289.1Genomic Context describing neighboring genes Neighboring gene potassium channel subfamily K member 18 Neighboring gene Tub domain-containing protein ktub Neighboring gene glycerophosphocholine phosphodiesterase GPCPD1 Neighboring gene uncharacterized LOC6600861 Neighboring gene mago, exon junction complex subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825289 Unplaced Scaffold Reference DperRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane and TPR repeat-containing protein CG4050
Names
Dper\GL10177
Dper\GL10177-PA
dper_GLEANR_10237

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila persimilis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DperRS2

Genomic

  1. NW_020825289.1 Reference DperRS2

    Range
    20565308..20570247 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026986021.1 → XP_026841822.1  transmembrane and TPR repeat-containing protein CG4050

    UniProtKB/TrEMBL
    B4H4W9
    Related
    XP_026841822.1, XM_026986021.1
    Conserved Domains (3) summary
    sd00006
    Location:604 → 631
    TPR; TPR repeat [structural motif]
    pfam08409
    Location:330 → 402
    DUF1736; Domain of unknown function (DUF1736)
    cl26002
    Location:485 → 877
    TPR_11; TPR repeat

  2. XM_026986022.1 → XP_026841823.1  transmembrane and TPR repeat-containing protein CG4050

    UniProtKB/TrEMBL
    B4H4W9
    Related
    XP_026841823.1, XM_026986022.1
    Conserved Domains (3) summary
    sd00006
    Location:604 → 631
    TPR; TPR repeat [structural motif]
    pfam08409
    Location:330 → 402
    DUF1736; Domain of unknown function (DUF1736)
    cl26002
    Location:485 → 877
    TPR_11; TPR repeat

  3. XM_026986023.1 → XP_026841824.1  transmembrane and TPR repeat-containing protein CG4050

    UniProtKB/TrEMBL
    B4H4W9
    Related
    XP_026841824.1, XM_026986023.1
    Conserved Domains (3) summary
    sd00006
    Location:604 → 631
    TPR; TPR repeat [structural motif]
    pfam08409
    Location:330 → 402
    DUF1736; Domain of unknown function (DUF1736)
    cl26002
    Location:485 → 877
    TPR_11; TPR repeat

  4. XM_026986024.1 → XP_026841825.1  transmembrane and TPR repeat-containing protein CG4050

    UniProtKB/TrEMBL
    B4H4W9
    Related
    XP_026841825.1, XM_026986024.1
    Conserved Domains (3) summary
    sd00006
    Location:604 → 631
    TPR; TPR repeat [structural motif]
    pfam08409
    Location:330 → 402
    DUF1736; Domain of unknown function (DUF1736)
    cl26002
    Location:485 → 877
    TPR_11; TPR repeat
Nucleotide Protein
Heading Accession and Version

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