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LOC5504548 beta-1,3-galactosyltransferase 5 [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 5504548, updated on 26-Jun-2024

Summary

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Gene symbol
LOC5504548
Gene description
beta-1,3-galactosyltransferase 5
Locus tag
NEMVEDRAFT_v1g129948
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
Also known as
NVE11875; NV2g003662
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Genomic context

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See LOC5504548 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
2
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 10 NC_064043.1 (4063967..4066521, complement)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834143.1 (233352..235926)

Chromosome 10 - NC_064043.1Genomic Context describing neighboring genes Neighboring gene CRAL-TRIO domain-containing protein C589.09, mitochondrial Neighboring gene PC3-like endoprotease variant B Neighboring gene uncharacterized LOC125573215 Neighboring gene N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2 Neighboring gene probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 5
Names
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064043.1 Reference jaNemVect1.1

    Range
    4063967..4066521 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032372849.2 → XP_032228740.1  beta-1,3-galactosyltransferase 5

    Conserved Domains (1) summary
    cl21608
    Location:135 → 328
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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