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Conserved domains on  [gi|1806704368|ref|XP_032228740|]
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beta-1,3-galactosyltransferase 5 [Nematostella vectensis]

Protein Classification

glycosyltransferase family protein( domain architecture ID 229488)

glycosyltransferase family protein may synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Galactosyl_T super family cl21608
Galactosyltransferase; This family includes the galactosyltransferases UDP-galactose: ...
 135-328 6.71e-50

Galactosyltransferase; This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2.


The actual alignment was detected with superfamily member pfam01762:

Pssm-ID: 473923 [Multi-domain]  Cd Length: 195  Bit Score: 166.73  E-value: 6.71e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806704368 135 REAIRLSWGNQENAINKGKwsrganatwKTVFFLGQSSDDEKnQLLRL---EAARYKDIVIGDFLDTYRNLTLKTILILR 211
Cdd:pfam01762   3 RNAIRKTWMNQGNSEGGRI---------KSLFLVGLSADTDG-KVADLvmeEAKLYGDIVVVDFEDTYENLTFKTLTGLL 72

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806704368 212 WAKKHCPQAQYILKTDHDCFVNVLPLMRLL---RI--RKPLYLGRIHWKNTPTRNKTSKFYVSKAEFSEPVYPPYAAGGG 286
Cdd:pfam01762  73 WAVSKCPSAKYIGKIDDDVYFFPDKLLSLLdngNIdpSESSFYGYVMEEGPVIRNKKSKWYVSPSDYKCSRYPPYASGPF 152

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 1806704368 287 YVFKGSLLPSLLQASHEAAVFPMEDAYFGSLMKVIGVKAQSN 328
Cdd:pfam01762 153 YVLSRDAAEKLLKASKHRRFLQIEDVYVGILANDLGISRVNL 194
 
Name Accession Description Interval E-value
Galactosyl_T pfam01762
Galactosyltransferase; This family includes the galactosyltransferases UDP-galactose: ...
 135-328 6.71e-50

Galactosyltransferase; This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2.


Pssm-ID: 426415 [Multi-domain]  Cd Length: 195  Bit Score: 166.73  E-value: 6.71e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806704368 135 REAIRLSWGNQENAINKGKwsrganatwKTVFFLGQSSDDEKnQLLRL---EAARYKDIVIGDFLDTYRNLTLKTILILR 211
Cdd:pfam01762   3 RNAIRKTWMNQGNSEGGRI---------KSLFLVGLSADTDG-KVADLvmeEAKLYGDIVVVDFEDTYENLTFKTLTGLL 72

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806704368 212 WAKKHCPQAQYILKTDHDCFVNVLPLMRLL---RI--RKPLYLGRIHWKNTPTRNKTSKFYVSKAEFSEPVYPPYAAGGG 286
Cdd:pfam01762  73 WAVSKCPSAKYIGKIDDDVYFFPDKLLSLLdngNIdpSESSFYGYVMEEGPVIRNKKSKWYVSPSDYKCSRYPPYASGPF 152

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 1806704368 287 YVFKGSLLPSLLQASHEAAVFPMEDAYFGSLMKVIGVKAQSN 328
Cdd:pfam01762 153 YVLSRDAAEKLLKASKHRRFLQIEDVYVGILANDLGISRVNL 194
PLN03133 PLN03133
beta-1,3-galactosyltransferase; Provisional
 121-288 9.25e-19

beta-1,3-galactosyltransferase; Provisional


Pssm-ID: 215596 [Multi-domain]  Cd Length: 636  Bit Score: 88.32  E-value: 9.25e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806704368 121 LLAAVHSCHESFSMREAIRLSWgNQENAINKGKWSrganatwkTVFFLGQSSDDEKNQLLRLEAARYKDIVIGDFLDTYR 200
Cdd:PLN03133  387 LFIGVFSTANNFKRRMAVRRTW-MQYDAVRSGAVA--------VRFFVGLHKNQMVNEELWNEARTYGDIQLMPFVDYYS 457

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806704368 201 NLTLKTILILRWAKKhCPQAQYILKTDHDCFVNV---LPLMRLLRIRKPLYLGRIHWKNTPTRNKTSKFYVSKAEFSEPV 277
Cdd:PLN03133  458 LITWKTLAICIFGTE-VVSAKYVMKTDDDAFVRVdevLASLKRTNVSHGLLYGLINSDSQPHRNPDSKWYISPEEWPEET 536

                         170
                  ....*....|.
gi 1806704368 278 YPPYAAGGGYV 288
Cdd:PLN03133  537 YPPWAHGPGYV 547
 
Name Accession Description Interval E-value
Galactosyl_T pfam01762
Galactosyltransferase; This family includes the galactosyltransferases UDP-galactose: ...
 135-328 6.71e-50

Galactosyltransferase; This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2.


Pssm-ID: 426415 [Multi-domain]  Cd Length: 195  Bit Score: 166.73  E-value: 6.71e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806704368 135 REAIRLSWGNQENAINKGKwsrganatwKTVFFLGQSSDDEKnQLLRL---EAARYKDIVIGDFLDTYRNLTLKTILILR 211
Cdd:pfam01762   3 RNAIRKTWMNQGNSEGGRI---------KSLFLVGLSADTDG-KVADLvmeEAKLYGDIVVVDFEDTYENLTFKTLTGLL 72

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806704368 212 WAKKHCPQAQYILKTDHDCFVNVLPLMRLL---RI--RKPLYLGRIHWKNTPTRNKTSKFYVSKAEFSEPVYPPYAAGGG 286
Cdd:pfam01762  73 WAVSKCPSAKYIGKIDDDVYFFPDKLLSLLdngNIdpSESSFYGYVMEEGPVIRNKKSKWYVSPSDYKCSRYPPYASGPF 152

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 1806704368 287 YVFKGSLLPSLLQASHEAAVFPMEDAYFGSLMKVIGVKAQSN 328
Cdd:pfam01762 153 YVLSRDAAEKLLKASKHRRFLQIEDVYVGILANDLGISRVNL 194
PLN03133 PLN03133
beta-1,3-galactosyltransferase; Provisional
 121-288 9.25e-19

beta-1,3-galactosyltransferase; Provisional


Pssm-ID: 215596 [Multi-domain]  Cd Length: 636  Bit Score: 88.32  E-value: 9.25e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806704368 121 LLAAVHSCHESFSMREAIRLSWgNQENAINKGKWSrganatwkTVFFLGQSSDDEKNQLLRLEAARYKDIVIGDFLDTYR 200
Cdd:PLN03133  387 LFIGVFSTANNFKRRMAVRRTW-MQYDAVRSGAVA--------VRFFVGLHKNQMVNEELWNEARTYGDIQLMPFVDYYS 457

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806704368 201 NLTLKTILILRWAKKhCPQAQYILKTDHDCFVNV---LPLMRLLRIRKPLYLGRIHWKNTPTRNKTSKFYVSKAEFSEPV 277
Cdd:PLN03133  458 LITWKTLAICIFGTE-VVSAKYVMKTDDDAFVRVdevLASLKRTNVSHGLLYGLINSDSQPHRNPDSKWYISPEEWPEET 536

                         170
                  ....*....|.
gi 1806704368 278 YPPYAAGGGYV 288
Cdd:PLN03133  537 YPPWAHGPGYV 547
PTZ00210 PTZ00210
UDP-GlcNAc-dependent glycosyltransferase; Provisional
 170-256 2.99e-04

UDP-GlcNAc-dependent glycosyltransferase; Provisional


Pssm-ID: 140237  Cd Length: 382  Bit Score: 42.57  E-value: 2.99e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806704368 170 QSSDDEKNQLLRLEAARYKDIVI---GDFLDTYRN---------------LTLKTILILRWAKKHCPQAQYILKTDHDCF 231
Cdd:PTZ00210  132 QSNSYLISHSLKEEAARTHDIITlptNDVSPSTRKkigengnwgieaevaMSRKTYLWLRFALHMFPNVSYIVKGDDDIF 211

                          90       100
                  ....*....|....*....|....*..
gi 1806704368 232 VNVLPLMRLLRI--RKPLYLGRIHWKN 256
Cdd:PTZ00210  212 IRVPKYLADLRVmpRHGLYMGRYNYYN 238
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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