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CDC27 cell division cycle 27 [ Bos taurus (domestic cattle) ]

Gene ID: 540660, updated on 12-Oct-2024

Summary

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Official Symbol
CDC27provided by VGNC
Official Full Name
cell division cycle 27provided by VGNC
Primary source
VGNC:VGNC:50040
See related
BGD:BT13848; Ensembl:ENSBTAG00000002726
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See CDC27 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 19 NC_037346.1 (46203908..46261691, complement)

Chromosome 19 - NC_037346.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132343093 Neighboring gene microtubule associated protein tau Neighboring gene KAT8 regulatory NSL complex subunit 1 Neighboring gene FMR1-interacting protein NUFIP2-like Neighboring gene myosin light chain 4 Neighboring gene nuclear FMR1 interacting protein 2 Neighboring gene integrin subunit beta 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037346.1 Chromosome 19 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell division IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cell division cycle protein 27 homolog
Names
cell division cycle 27 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001105428.1 → NP_001098898.1  cell division cycle protein 27 homolog

    See identical proteins and their annotated locations for NP_001098898.1

    Status: PROVISIONAL

    Source sequence(s)
    BC153259
    UniProtKB/Swiss-Prot
    A7Z061
    UniProtKB/TrEMBL
    A0A3Q1MS93
    Related
    ENSBTAP00000057334.2, ENSBTAT00000070176.2
    Conserved Domains (3) summary
    COG0457
    Location:502 → 763
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:568 → 596
    TPR; TPR repeat [structural motif]
    pfam12895
    Location:17 → 92
    ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037346.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    46203908..46261691 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010816379.4 → XP_010814681.1  cell division cycle protein 27 homolog isoform X3

    See identical proteins and their annotated locations for XP_010814681.1

    UniProtKB/TrEMBL
    A0A3Q1MS93
    Conserved Domains (3) summary
    COG0457
    Location:501 → 762
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:567 → 595
    TPR; TPR repeat [structural motif]
    pfam12895
    Location:17 → 92
    ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3

  2. XM_005220915.5 → XP_005220972.1  cell division cycle protein 27 homolog isoform X2

    See identical proteins and their annotated locations for XP_005220972.1

    UniProtKB/TrEMBL
    A0A3Q1MS93
    Conserved Domains (3) summary
    COG0457
    Location:507 → 768
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:573 → 601
    TPR; TPR repeat [structural motif]
    pfam12895
    Location:17 → 92
    ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3

  3. XM_005220914.5 → XP_005220971.1  cell division cycle protein 27 homolog isoform X1

    See identical proteins and their annotated locations for XP_005220971.1

    UniProtKB/TrEMBL
    A0A3Q1MS93, A0AAF6YJV9
    Related
    ENSBTAP00000003533.5, ENSBTAT00000003533.6
    Conserved Domains (3) summary
    COG0457
    Location:508 → 769
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:574 → 602
    TPR; TPR repeat [structural motif]
    pfam12895
    Location:17 → 92
    ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3

  4. XM_024980362.2 → XP_024836130.1  cell division cycle protein 27 homolog isoform X7

    Conserved Domains (3) summary
    COG0457
    Location:501 → 761
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:567 → 595
    TPR; TPR repeat [structural motif]
    pfam12895
    Location:17 → 92
    ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3

  5. XM_024980361.2 → XP_024836129.1  cell division cycle protein 27 homolog isoform X6

    Conserved Domains (3) summary
    COG0457
    Location:502 → 762
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:568 → 596
    TPR; TPR repeat [structural motif]
    pfam12895
    Location:17 → 92
    ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3

  6. XM_010816381.4 → XP_010814683.1  cell division cycle protein 27 homolog isoform X5

    See identical proteins and their annotated locations for XP_010814683.1

    Conserved Domains (3) summary
    COG0457
    Location:508 → 768
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:574 → 602
    TPR; TPR repeat [structural motif]
    pfam12895
    Location:17 → 92
    ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3

  7. XM_059878202.1 → XP_059734185.1  cell division cycle protein 27 homolog isoform X4

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A7Z061.1 GenPept UniProtKB/Swiss-Prot:A7Z061

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