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SLC35A5 solute carrier family 35 member A5 [ Bos taurus (domestic cattle) ]

Gene ID: 534488, updated on 18-Aug-2024

Summary

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Official Symbol
SLC35A5provided by VGNC
Official Full Name
solute carrier family 35 member A5provided by VGNC
Primary source
VGNC:VGNC:34822
See related
BGD:BT23131; Ensembl:ENSBTAG00000009085
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 1 NC_037328.1 (57343877..57364456)

Chromosome 1 - NC_037328.1Genomic Context describing neighboring genes Neighboring gene B and T lymphocyte associated Neighboring gene autophagy related 3 Neighboring gene coiled-coil domain containing 80 Neighboring gene uncharacterized LOC132345593

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037328.1 Chromosome 1 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
  2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
  3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyrimidine nucleotide-sugar transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pyrimidine nucleotide-sugar transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-sugar transporter protein SLC35A5
Names
probable UDP-sugar transporter protein SLC35A5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001076025.2 → NP_001069493.2  UDP-sugar transporter protein SLC35A5

    See identical proteins and their annotated locations for NP_001069493.2

    Status: VALIDATED

    Source sequence(s)
    DT811793, DV875983, DV887318, DV892489
    UniProtKB/Swiss-Prot
    A6QPI1, Q0V8M4
    UniProtKB/TrEMBL
    A0AAF6YT79
    Conserved Domains (1) summary
    pfam04142
    Location:23 → 374
    Nuc_sug_transp; Nucleotide-sugar transporter

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037328.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    57343877..57364456
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005201331.5 → XP_005201388.2  UDP-sugar transporter protein SLC35A5 isoform X1

    See identical proteins and their annotated locations for XP_005201388.2

    UniProtKB/Swiss-Prot
    A6QPI1, Q0V8M4
    UniProtKB/TrEMBL
    A0AAF6YT79
    Related
    ENSBTAP00000011977.5, ENSBTAT00000011977.6
    Conserved Domains (1) summary
    pfam04142
    Location:23 → 374
    Nuc_sug_transp; Nucleotide-sugar transporter

  2. XM_005201332.5 → XP_005201389.4  UDP-sugar transporter protein SLC35A5 isoform X2

    UniProtKB/TrEMBL
    A0AAF6YT79

  3. XM_059885345.1 → XP_059741328.1  UDP-sugar transporter protein SLC35A5 isoform X5

  4. XM_059885343.1 → XP_059741326.1  UDP-sugar transporter protein SLC35A5 isoform X3

  5. XM_059885344.1 → XP_059741327.1  UDP-sugar transporter protein SLC35A5 isoform X4

  6. XM_024990368.2 → XP_024846136.1  UDP-sugar transporter protein SLC35A5 isoform X4

    Conserved Domains (1) summary
    pfam04142
    Location:12 → 255
    Nuc_sug_transp; Nucleotide-sugar transporter
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A6QPI1.1 GenPept UniProtKB/Swiss-Prot:A6QPI1

Gene LinkOut

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Molecular Biology Databases
Research Materials