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CD109 CD109 molecule [ Bos taurus (domestic cattle) ]

Gene ID: 534043, updated on 4-Oct-2024

Summary

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Official Symbol
CD109provided by VGNC
Official Full Name
CD109 moleculeprovided by VGNC
Primary source
VGNC:VGNC:27002
See related
BGD:BT19442; Ensembl:ENSBTAG00000013222
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See CD109 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
33
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 9 NC_037336.1 (13201883..13336581)

Chromosome 9 - NC_037336.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104972958 Neighboring gene solute carrier family 17 member 5 Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene low molecular weight phosphotyrosine protein phosphatase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037336.1 Chromosome 9 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CD109 antigen

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037336.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    13201883..13336581
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024996919.2 → XP_024852687.1  CD109 antigen

    UniProtKB/TrEMBL
    A0A3Q1LTK9, A0A3Q1M6A2
    Related
    ENSBTAP00000063825.2, ENSBTAT00000075304.2
    Conserved Domains (5) summary
    cd02897
    Location:907 → 1194
    A2M_2; Proteins similar to alpha2-macroglobulin (alpha (2)-M). This group also contains the pregnancy zone protein (PZP). Alpha(2)-M and PZP are broadly specific proteinase inhibitors. Alpha (2)-M is a major carrier protein in serum. The structural thioester ...
    pfam00207
    Location:693 → 782
    A2M; Alpha-2-macroglobulin family
    pfam01835
    Location:131 → 221
    A2M_N; MG2 domain
    pfam07677
    Location:1311 → 1395
    A2M_recep; A-macroglobulin receptor
    pfam07703
    Location:468 → 599
    A2M_N_2; Alpha-2-macroglobulin family N-terminal region
Nucleotide Protein Strain
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