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CADM2 cell adhesion molecule 2 [ Bos taurus (domestic cattle) ]

Gene ID: 517759, updated on 4-Oct-2024

Summary

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Official Symbol
CADM2provided by VGNC
Official Full Name
cell adhesion molecule 2provided by VGNC
Primary source
VGNC:VGNC:26695
See related
BGD:BT27953; Ensembl:ENSBTAG00000009219
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See CADM2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 1 NC_037328.1 (32827159..34102751)

Chromosome 1 - NC_037328.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112446987 Neighboring gene U6 spliceosomal RNA Neighboring gene capping protein, Arp2/3 and myosin-I linker protein 2-like Neighboring gene palmitoyltransferase ZDHHC16-like Neighboring gene microRNA mir-2285cm

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037328.1 Chromosome 1 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
cell adhesion molecule 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037328.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    32827159..34102751
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059887610.1 → XP_059743593.1  cell adhesion molecule 2 isoform X3

  2. XM_059887613.1 → XP_059743596.1  cell adhesion molecule 2 isoform X4

  3. XM_059887602.1 → XP_059743585.1  cell adhesion molecule 2 isoform X1

    Related
    ENSBTAP00000012150.5, ENSBTAT00000012150.7

  4. XM_010800962.4 → XP_010799264.1  cell adhesion molecule 2 isoform X2

    See identical proteins and their annotated locations for XP_010799264.1

    Conserved Domains (4) summary
    smart00294
    Location:388 → 406
    4.1m; putative band 4.1 homologues' binding motif
    pfam13927
    Location:227 → 300
    Ig_3; Immunoglobulin domain
    cd05884
    Location:141 → 223
    Ig2_Necl-3; Second immunoglobulin (Ig)-like domain of nectin-like molecule-3 (Necl-3, also known as cell adhesion molecule 2 (CADM2))
    cd07701
    Location:26 → 120
    Ig1_Necl-3; First (N-terminal) immunoglobulin (Ig)-like domain of nectin-like molecule-3 (Necl-3, also known as cell adhesion molecule 2 (CADM2))

  5. XM_059887605.1 → XP_059743588.1  cell adhesion molecule 2 isoform X1

Nucleotide Protein Strain
Heading Accession and Version

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