Conserved Protein Domain Family
Ig2_Necl-3

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cd05884: Ig2_Necl-3 (this model, PSSM-Id:319320 is obsolete and has been replaced by 409467)
Second immunoglobulin (Ig)-like domain of nectin-like molecule-3 (Necl-3, also known as cell adhesion molecule 2 (CADM2))
Ig2_Necl-3: second immunoglobulin (Ig)-like domain of nectin-like molecule-3 (Necl-3, also known as cell adhesion molecule 2 (CADM2)). Nectin-like molecules have similar domain structures to those of nectins. At least five nectin-like molecules have been identified (Necl-1 - Necl-5). These have an extracellular region containing three Ig-like domains, one transmembrane region, and one cytoplasmic region. Necl-3 has been shown to accumulate in tissues of the central and peripheral nervous system, where it is expressed in ependymal cells and myelinated axons. It is observed at the interface between the axon shaft and the myelin sheath. Ig domains are likely to participate in ligand binding and recognition.
Statistics
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PSSM-Id: 319320
Aligned: 5 rows
Threshold Bit Score: 151.69
Created: 11-Jan-2008
Updated: 18-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q6DJ83    141 TIQLTCKSSgsKPAADIRWFKNDqeitdvqkiqqqdsngkTFTVTSSLVFQgdrkDDGAVIRCRVDHESLTStpQIAKQV 220 western clawed frog
XP_416672  33 RMQLTCKTSgsKPAADIRWFKNDkevkdvkylkeedanrkTFTVSSTMDFLadrnDDGAVISCRVDHESLNStpQIAMQV 112 chicken
CAH56314   37 LMQLTCKTSgsKPAADIRWFKNDkeikdvkylkeedanrkTFTVSSTLDFRvdrsDDGVAVICRVDHESLNAtpQVAMQV 116 human
AAN16368  143 LMQLTCKTSgsKPAADIRWFKNDkeikdvkylkkedanrkTFTVSSTLDFRvdrsDDGVAVICRVDHESLNTtpQVAMQV 222 human
NP_956958 156 HITLTCVTSgsKPAADVRWFKNEmevkgak---evnasgkTFTVKSSLRLHvnrdDDGVAYTCRVDHVALTAthEETTQV 232 zebrafish
Q6DJ83    221 LEI 223 western clawed frog
XP_416672 113 LEI 115 chicken
CAH56314  117 LEI 119 human
AAN16368  223 LEI 225 human
NP_956958 233 LEV 235 zebrafish
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