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RSPO1 R-spondin 1 [ Bos taurus (domestic cattle) ]

Gene ID: 511675, updated on 17-Aug-2024

Summary

Official Symbol
RSPO1provided by VGNC
Official Full Name
R-spondin 1provided by VGNC
Primary source
VGNC:VGNC:34188
See related
BGD:BT20367
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

See RSPO1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (108267191..108287862)

Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene cell division cycle associated 8 Neighboring gene chromosome 3 C1orf109 homolog Neighboring gene G protein nucleolar 2 Neighboring gene dynein axonemal light intermediate chain 1

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

General protein information

Preferred Names
R-spondin-1
Names
R-spondin homolog
R-spondin1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001105621.1NP_001099091.1  R-spondin-1 precursor

    See identical proteins and their annotated locations for NP_001099091.1

    Status: PROVISIONAL

    Source sequence(s)
    BC149052
    UniProtKB/TrEMBL
    A7E3W1, A7YY21
    Conserved Domains (3) summary
    cd00064
    Location:100142
    FU; Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is a serine-kinase dependent proprotein processor. Other members of this family include endoproteases and cell surface receptors.
    pfam15913
    Location:42144
    Furin-like_2; Furin-like repeat, cysteine-rich
    cl15278
    Location:151208
    TSP_1; Thrombospondin type 1 domain

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    108267191..108287862
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005204700.5XP_005204757.1  R-spondin-1 isoform X1

    See identical proteins and their annotated locations for XP_005204757.1

    UniProtKB/TrEMBL
    A7E3W1
    Conserved Domains (3) summary
    cd00064
    Location:100142
    FU; Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is a serine-kinase dependent proprotein processor. Other members of this family include endoproteases and cell surface receptors.
    pfam15913
    Location:42144
    Furin-like_2; Furin-like repeat, cysteine-rich
    cl15278
    Location:151208
    TSP_1; Thrombospondin type 1 domain