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CNBD0390 hypothetical protein [ Cryptococcus neoformans var. neoformans B-3501A ]

Gene ID: 4935414, updated on 6-Jun-2024

Summary

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Gene symbol
CNBD0390
Gene description
hypothetical protein
Locus tag
CNBD0390
See related
FungiDB:CNBD0390; VEuPathDB:CNBD0390
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cryptococcus neoformans var. neoformans B-3501A (strain: B-3501A, variety: neoformans, serotype: D)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex
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Genomic context

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See CNBD0390 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
13
Sequence:
Chromosome: 4; NC_009180.1 (126349..132295, complement)

Chromosome 4 - NC_009180.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009180.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans. Loftus BJ, et al. Science, 2005 Feb 25. PMID 15653466, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
hypothetical protein
XP_775989.1
  • HMMPfam hit to Helicase_C, Helicase conserved C-terminal domain, score: 90.6, E(): 4e-24; HMMPfam hit to SNF2_N, SNF2 family N-terminal domain, score: 363.3, E(): 3.3e-106

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009180.1 Reference assembly

    Range
    126349..132295 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_770896.1 → XP_775989.1  hypothetical protein CNBD0390 [Cryptococcus neoformans var. neoformans B-3501A]

    See identical proteins and their annotated locations for XP_775989.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0CO17, Q55US0, Q5KHM0
    UniProtKB/TrEMBL
    A0A225Z4G9
    Conserved Domains (4) summary
    cd00046
    Location:891 → 1037
    DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
    cd00079
    Location:1450 → 1574
    HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
    pfam00176
    Location:874 → 1178
    SNF2_N; SNF2 family N-terminal domain
    pfam13892
    Location:622 → 760
    DBINO; DNA-binding domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P0CO17.1

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