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AGOS_AFL031W AFL031Wp [ Eremothecium gossypii ATCC 10895 ]

Gene ID: 4621750, updated on 16-Nov-2023

Summary

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Gene symbol
AGOS_AFL031W
Gene description
AFL031Wp
Locus tag
AGOS_AFL031W
Gene type
protein coding
RNA name
AFL031Wp
RefSeq status
PROVISIONAL
Organism
Eremothecium gossypii ATCC 10895 (strain: ATCC 10895, culture-collection: ATCC:10895)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium
Old locus tag
AFL031W
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Genomic context

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See AGOS_AFL031W in Genome Data Viewer
Location:
chromosome: VI
Exon count:
1
Sequence:
Chromosome: VI; NC_005787.5 (377592..379145)

Chromosome VI - NC_005787.5Genomic Context describing neighboring genes Neighboring gene AFL034Wp Neighboring gene AFL033Wp Neighboring gene AFL032Cp Neighboring gene AFL030Cp Neighboring gene AFL029Wp

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_005787.5

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Ashbya gossypii genome as a tool for mapping the ancient Saccharomyces cerevisiae genome. Dietrich FS, et al. Science, 2004 Apr 9. PMID 15001715

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
AFL031Wp
NP_985517.2
  • Syntenic homolog of Saccharomyces cerevisiae YBR239C (ERT1)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_005787.5 Reference assembly

    Range
    377592..379145
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_210871.2 → NP_985517.2  AFL031Wp [Eremothecium gossypii ATCC 10895]

    See identical proteins and their annotated locations for NP_985517.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q754V2
    Conserved Domains (3) summary
    smart00066
    Location:13 → 56
    GAL4; GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain
    cd00130
    Location:382 → 490
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam00989
    Location:374 → 486
    PAS; PAS fold
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q754V2.2

Gene LinkOut

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Molecular Biology Databases
Research Materials