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mthfsd.L methenyltetrahydrofolate synthetase domain containing L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 446264, updated on 18-Sep-2024

Summary

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Official Symbol
mthfsd.L
Official Full Name
methenyltetrahydrofolate synthetase domain containing L homeolog
Primary source
Xenbase:XB-GENE-5787620
Locus tag
XELAEV_18022673mg
See related
EnsemblRapid:ENSXLAG00005026359
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
mthfsd
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Genomic context

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See mthfsd.L in Genome Data Viewer
Location:
chromosome: 4L
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4L NC_054377.1 (58343048..58356302)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4L NC_030730.1 (53131151..53144494)

Chromosome 4L - NC_054377.1Genomic Context describing neighboring genes Neighboring gene GABA(A) receptor-associated protein like 2 L homeolog Neighboring gene lysyl-tRNA synthetase 1 L homeolog Neighboring gene uncharacterized LOC121403022 Neighboring gene forkhead box F1 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning. Kırlı K, et al. Elife, 2015 Dec 17. PMID 26673895, Free PMC Article
  2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
methenyltetrahydrofolate synthase domain-containing protein
Names
methenyltetrahydrofolate synthetase domain-containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001092984.1 → NP_001086453.1  methenyltetrahydrofolate synthase domain-containing protein

    See identical proteins and their annotated locations for NP_001086453.1

    Status: PROVISIONAL

    Source sequence(s)
    BC094085
    UniProtKB/Swiss-Prot
    Q52L34, Q6AXA2
    UniProtKB/TrEMBL
    A0A974D4L4
    Related
    ENSXLAP00005078438.1, ENSXLAT00005080029.1
    Conserved Domains (2) summary
    cd12270
    Location:312 → 383
    RRM_MTHFSD; RNA recognition motif in vertebrate methenyltetrahydrofolate synthetase domain-containing proteins
    cl00360
    Location:13 → 210
    5-FTHF_cyc-lig; 5-formyltetrahydrofolate cyclo-ligase family

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054377.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    58343048..58356302
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018256763.2 → XP_018112252.1  methenyltetrahydrofolate synthase domain-containing protein isoform X1

    UniProtKB/TrEMBL
    A0A8J0UZ79, A0A974D4L4
    Related
    ENSXLAP00005078616.1, ENSXLAT00005080208.1
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q52L34.1 GenPept UniProtKB/Swiss-Prot:Q52L34

Gene LinkOut

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