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ndrg3.S NDRG family member 3 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 443853, updated on 17-Aug-2024

Summary

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Official Symbol
ndrg3.S
Official Full Name
NDRG family member 3 S homeolog
Primary source
Xenbase:XB-GENE-6078876
Locus tag
XELAEV_18046656mg
See related
EnsemblRapid:ENSXLAG00005032317
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
ndrg3
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Genomic context

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Location:
chromosome: 9_10S
Exon count:
18
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10S NC_054388.1 (38317272..38346845, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10S NC_030741.1 (32154661..32184220, complement)

Chromosome 9_10S - NC_054388.1Genomic Context describing neighboring genes Neighboring gene matrix metallopeptidase 24 S homeolog Neighboring gene uncharacterized LOC121398938 Neighboring gene Src-like-adaptor 2 S homeolog Neighboring gene coiled-coil domain containing 28A S homeolog Neighboring gene deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Protein interactomes of protein phosphatase 2A B55 regulatory subunits reveal B55-mediated regulation of replication protein A under replication stress. Wang F, et al. Sci Rep, 2018 Feb 8. PMID 29422626, Free PMC Article
  2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Clone Names

  • MGC79077

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
protein NDRG3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001091958.1 → NP_001085427.1  protein NDRG3

    See identical proteins and their annotated locations for NP_001085427.1

    Status: PROVISIONAL

    Source sequence(s)
    BC072731
    UniProtKB/Swiss-Prot
    Q6GQL1
    UniProtKB/TrEMBL
    A0A974BU42
    Related
    ENSXLAP00005096814.1, ENSXLAT00005098594.1
    Conserved Domains (2) summary
    COG0596
    Location:51 → 312
    MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]
    pfam03096
    Location:32 → 317
    Ndr; Ndr family

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054388.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    38317272..38346845 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018237436.2 → XP_018092925.1  protein NDRG3 isoform X1

    UniProtKB/TrEMBL
    A0A8J0TXU1, A0A974BU42
    Related
    ENSXLAP00005097176.1, ENSXLAT00005098962.1

  2. XM_018237440.2 → XP_018092929.1  protein NDRG3 isoform X1

    UniProtKB/TrEMBL
    A0A8J0TXU1, A0A974BU42
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6GQL1.1 GenPept UniProtKB/Swiss-Prot:Q6GQL1

Gene LinkOut

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